Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
VAPBO95292 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
VAPBO95292 FAM35CP-201ENST00000554755 2470 ntBASIC2.92□□□□□ -1.94
VAPBO95292 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.92□□□□□ -1.94
VAPBO95292 RNU1-35P-201ENST00000362782 153 ntBASIC2.92□□□□□ -1.94
VAPBO95292 RNU6-1077P-201ENST00000410506 102 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.92□□□□□ -1.94
VAPBO95292 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.92□□□□□ -1.94
VAPBO95292 AL451074.5-201ENST00000415894 435 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC006548.1-201ENST00000427470 102 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AL513321.1-201ENST00000441175 761 ntBASIC2.92□□□□□ -1.94
VAPBO95292 RAB11AP1-201ENST00000442978 646 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AL592437.1-201ENST00000443781 492 ntBASIC2.92□□□□□ -1.94
VAPBO95292 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPBO95292 RPL37P4-201ENST00000448908 268 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC093392.2-201ENST00000450682 337 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.92□□□□□ -1.94
VAPBO95292 AL445669.2-201ENST00000454425 421 ntBASIC2.92□□□□□ -1.94
VAPBO95292 MTND2P6-201ENST00000455337 1030 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.92□□□□□ -1.94
VAPBO95292 RPL27AP5-201ENST00000469428 449 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC034236.1-201ENST00000469891 373 ntBASIC2.92□□□□□ -1.94
VAPBO95292 GAPDHP39-201ENST00000481866 979 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.92□□□□□ -1.94
VAPBO95292 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.92□□□□□ -1.94
VAPBO95292 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.92□□□□□ -1.94
VAPBO95292 AC022690.1-201ENST00000526681 550 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VAPBO95292 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.92□□□□□ -1.94
VAPBO95292 COX6CP3-201ENST00000580869 223 ntBASIC2.92□□□□□ -1.94
VAPBO95292 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.92□□□□□ -1.94
VAPBO95292 VN1R88P-201ENST00000596787 292 ntBASIC2.92□□□□□ -1.94
VAPBO95292 BDH2P1-201ENST00000602288 736 ntBASIC2.92□□□□□ -1.94
VAPBO95292 XIAPP1-201ENST00000603162 600 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC079880.2-201ENST00000603790 1213 ntBASIC2.92□□□□□ -1.94
VAPBO95292 MIR92B-201ENST00000607575 96 ntBASIC2.92□□□□□ -1.94
VAPBO95292 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.92□□□□□ -1.94
VAPBO95292 AC090116.1-201ENST00000615679 446 ntBASIC2.92□□□□□ -1.94
VAPBO95292 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC068722.2-201ENST00000618734 544 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC073569.3-201ENST00000619055 682 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AC004777.1-201ENST00000624317 287 ntBASIC2.92□□□□□ -1.94
VAPBO95292 CR381572.1-201ENST00000625098 102 ntBASIC2.92□□□□□ -1.94
VAPBO95292 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VAPBO95292 AC117529.2-201ENST00000512159 2068 ntBASIC2.92□□□□□ -1.94
VAPBO95292 AL136520.1-201ENST00000600311 1322 ntBASIC2.92□□□□□ -1.94
VAPBO95292 API5P2-201ENST00000397055 1498 ntBASIC2.91□□□□□ -1.94
VAPBO95292 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAPBO95292 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
VAPBO95292 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
VAPBO95292 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPBO95292 AC233728.2-201ENST00000425348 757 ntBASIC2.91□□□□□ -1.94
VAPBO95292 DUTP6-201ENST00000425573 462 ntBASIC2.91□□□□□ -1.94
VAPBO95292 AL512649.1-201ENST00000428997 581 ntBASIC2.91□□□□□ -1.94
VAPBO95292 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAPBO95292 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPBO95292 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.91□□□□□ -1.94
VAPBO95292 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.91□□□□□ -1.94
VAPBO95292 RPS26P21-201ENST00000475397 348 ntBASIC2.91□□□□□ -1.94
VAPBO95292 OR5H5P-201ENST00000503164 928 ntBASIC2.91□□□□□ -1.94
VAPBO95292 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPBO95292 AC103833.1-201ENST00000517442 172 ntBASIC2.91□□□□□ -1.94
VAPBO95292 ERHP1-201ENST00000523006 310 ntBASIC2.91□□□□□ -1.94
VAPBO95292 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPBO95292 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.91□□□□□ -1.94
VAPBO95292 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.91□□□□□ -1.94
VAPBO95292 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.91□□□□□ -1.94
VAPBO95292 AC006539.2-201ENST00000601729 572 ntBASIC2.91□□□□□ -1.94
VAPBO95292 AC016542.1-201ENST00000608259 493 ntBASIC2.91□□□□□ -1.94
VAPBO95292 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.91□□□□□ -1.94
VAPBO95292 FRG1DP-201ENST00000635586 771 ntBASIC2.91□□□□□ -1.94
VAPBO95292 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VAPBO95292 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VAPBO95292 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.9□□□□□ -1.95
VAPBO95292 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VAPBO95292 RPL9P7-201ENST00000330965 580 ntBASIC2.9□□□□□ -1.95
VAPBO95292 MIR422A-201ENST00000362286 90 ntBASIC2.9□□□□□ -1.95
VAPBO95292 SNORA9.2-201ENST00000365361 133 ntBASIC2.9□□□□□ -1.95
VAPBO95292 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VAPBO95292 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPBO95292 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPBO95292 PAICSP7-201ENST00000419829 962 ntBASIC2.9□□□□□ -1.95
VAPBO95292 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPBO95292 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPBO95292 AC022018.1-201ENST00000430685 241 ntBASIC2.9□□□□□ -1.95
VAPBO95292 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VAPBO95292 SETP8-201ENST00000435341 628 ntBASIC2.9□□□□□ -1.95
VAPBO95292 YWHAZP7-201ENST00000436906 631 ntBASIC2.9□□□□□ -1.95
VAPBO95292 RPS29P6-201ENST00000438196 145 ntBASIC2.9□□□□□ -1.95
VAPBO95292 AC004022.1-201ENST00000447766 1066 ntBASIC2.9□□□□□ -1.95
VAPBO95292 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
VAPBO95292 HMGB1P25-201ENST00000468402 607 ntBASIC2.9□□□□□ -1.95
VAPBO95292 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.9□□□□□ -1.95
VAPBO95292 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VAPBO95292 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.9□□□□□ -1.95
VAPBO95292 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.9□□□□□ -1.95
VAPBO95292 AC074051.3-201ENST00000570238 358 ntBASIC2.9□□□□□ -1.95
VAPBO95292 AC034268.2-201ENST00000571784 482 ntBASIC2.9□□□□□ -1.95
VAPBO95292 AC012493.2-201ENST00000595083 291 ntBASIC2.9□□□□□ -1.95
VAPBO95292 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms