Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 SNORD39.3-201ENST00000584451 71 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC069304.2-201ENST00000605154 435 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 HULC.1-201ENST00000612720 240 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC092650.2-201ENST00000619984 902 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC112200.1-201ENST00000625015 234 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC099063.3-201ENST00000642066 185 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AL161912.2-201ENST00000565707 3007 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 OR5BR1P-201ENST00000524992 1330 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RNU6-374P-201ENST00000364146 108 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RNU6-660P-201ENST00000364566 109 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RNU6-1293P-201ENST00000384077 107 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC245054.1-201ENST00000420944 258 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AL031736.2-201ENST00000426573 787 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 DLGAP5P1-201ENST00000430307 464 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 MTND2P20-201ENST00000440805 661 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 MTCO2P18-201ENST00000457151 658 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RPL30P11-201ENST00000495304 339 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 DSTNP2-201ENST00000504533 515 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 SNX5P1-201ENST00000505757 1041 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RN7SKP209-201ENST00000516888 304 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 SOD1P3-201ENST00000518682 454 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC022790.1-201ENST00000522872 204 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RSL24D1P11-201ENST00000591045 491 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC020914.6-201ENST00000594327 272 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 HSPE1P14-201ENST00000605812 302 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RN7SKP299-201ENST00000606679 301 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC090116.1-201ENST00000615679 446 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC004825.2-201ENST00000616634 455 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RNU6-156P-201ENST00000621869 107 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC098679.5-201ENST00000624394 571 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC092184.1-201ENST00000625042 715 ntBASIC3.94□□□□□ -1.78
SIX4Q9UIU6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX4Q9UIU6 AC007823.1-201ENST00000569932 1566 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 SNRPEP3-201ENST00000338402 276 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 RNU6-623P-201ENST00000363143 105 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 RNA5SP391-201ENST00000363456 119 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 Y_RNA.302-201ENST00000364997 102 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 RNU6-1122P-201ENST00000384449 107 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 PTMAP2-201ENST00000397627 327 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 DSTNP4-201ENST00000399472 474 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AL138880.1-201ENST00000405824 642 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 HSPE1P8-201ENST00000406997 288 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AL603766.1-201ENST00000407763 664 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 RNU2-28P-201ENST00000410457 189 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 RN7SKP27-201ENST00000410684 333 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 MTCYBP38-201ENST00000417160 1123 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 HMGB3P20-201ENST00000417997 600 ntBASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX4Q9UIU6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms