Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 RPS3AP54-201ENST00000435535 734 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 SNRPEP7-201ENST00000438350 220 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 RPL23AP89-201ENST00000439324 255 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AL357520.1-201ENST00000441557 453 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AL022238.1-201ENST00000442557 355 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 HSFY6P-201ENST00000445573 403 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC093899.1-201ENST00000457984 376 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 RPS20P21-201ENST00000466859 343 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC006517.1-201ENST00000480485 328 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC104057.1-201ENST00000515547 497 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC013828.2-201ENST00000532487 235 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 CYCSP29-201ENST00000533731 318 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 MIR5697-201ENST00000578045 78 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC067959.1-201ENST00000604334 379 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AL589743.7-201ENST00000612637 233 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC008498.1-201ENST00000613012 531 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 BMS1P21-201ENST00000634565 365 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP29Q9HBJ7 AC092447.7-201ENST00000422212 1621 ntBASIC4.34□□□□□ -1.71
USP29Q9HBJ7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
USP29Q9HBJ7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
USP29Q9HBJ7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.72
USP29Q9HBJ7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC006378.2-201ENST00000623178 2476 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC130650.2-201ENST00000618736 2403 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AL158163.1-201ENST00000603915 1649 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 MIR383-201ENST00000362257 73 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 RNU1-14P-201ENST00000362759 152 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AL022722.2-201ENST00000402519 180 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 RNU6-248P-201ENST00000410720 107 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 RAD23BP2-201ENST00000416003 1207 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 OFD1P18Y-201ENST00000420889 959 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC109583.1-201ENST00000432156 268 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC104073.1-201ENST00000451988 151 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 USP9YP34-201ENST00000453983 808 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 RPS7P7-201ENST00000463499 571 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 RPL9P33-201ENST00000484311 566 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC090453.1-201ENST00000495560 436 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC025554.1-201ENST00000505641 188 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 RNA5SP49-201ENST00000516450 115 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC245505.1-201ENST00000556398 224 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 MIR1254-2-201ENST00000579553 63 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AP001180.3-201ENST00000582221 145 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 MIR4307-201ENST00000582802 84 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 BNIP3P23-201ENST00000599655 511 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 PRELID3BP8-201ENST00000604148 295 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AL109618.2-201ENST00000605527 211 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 AC093591.3-201ENST00000634516 308 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 CRYM-AS1-204ENST00000637983 556 ntBASIC4.33□□□□□ -1.72
USP29Q9HBJ7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.33□□□□□ -1.72
USP29Q9HBJ7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC027514.1-201ENST00000588561 1603 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC097504.1-201ENST00000515103 2415 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AL022578.1-201ENST00000439330 1433 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
USP29Q9HBJ7 RPL23AP57-201ENST00000332361 466 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 RNU6-289P-201ENST00000364093 107 ntBASIC4.32□□□□□ -1.72
USP29Q9HBJ7 RNU6-343P-201ENST00000364709 104 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms