Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CENPUP2-201ENST00000555897 1186 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AL391840.1-201ENST00000571144 367 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC008752.3-201ENST00000588113 712 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 BNIP3P23-201ENST00000599655 511 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC243773.3-201ENST00000613270 256 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC139713.2-215ENST00000641428 5037 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 AC022031.1-201ENST00000585985 2593 ntBASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SLC44A3Q8N4M1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SLC44A3Q8N4M1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.53□□□□□ -1.69
SLC44A3Q8N4M1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SLC44A3Q8N4M1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.53□□□□□ -1.69
SLC44A3Q8N4M1 AC126323.6-202ENST00000568092 3511 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC025125.1-201ENST00000624743 1922 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 OR4A15-201ENST00000314706 1035 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-1103P-201ENST00000384150 107 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-809P-201ENST00000384461 107 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-876P-201ENST00000391295 104 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RN7SKP266-201ENST00000410232 287 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC233981.1-201ENST00000423224 461 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AL445669.1-201ENST00000426743 755 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 MTCO2P11-201ENST00000431069 680 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RABEPKP1-201ENST00000440529 1026 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 KCTD9P5-201ENST00000504141 1170 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 MTND5P4-201ENST00000514978 288 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RNA5SP497-201ENST00000516081 97 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-150P-201ENST00000516237 95 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AP003467.2-201ENST00000520175 319 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RPL21P5-201ENST00000554662 472 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC053481.4-201ENST00000583164 216 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AL161729.3-201ENST00000603533 673 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AL020991.1-201ENST00000612314 373 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC010133.1-201ENST00000615809 842 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 FARSBP1-201ENST00000435808 1778 ntBASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SLC44A3Q8N4M1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-769P-201ENST00000384407 104 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-225P-201ENST00000384613 103 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 RNU6-1011P-201ENST00000384668 107 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AL080315.1-201ENST00000406055 466 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 HMGB3P20-201ENST00000417997 600 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 RSU1P2-202ENST00000437884 485 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AL035551.1-201ENST00000446931 348 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC104651.2-201ENST00000447549 528 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC092757.1-201ENST00000467293 467 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC020890.1-201ENST00000491837 504 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 RNF138P1-201ENST00000502765 546 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 NPM1P41-201ENST00000512920 831 ntBASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A3Q8N4M1 ARL2BPP5-201ENST00000523141 481 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms