Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.7□□□□□ -1.82
GABPAQ06546 AC127526.1-201ENST00000417526 366 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.7□□□□□ -1.82
GABPAQ06546 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.7□□□□□ -1.82
GABPAQ06546 AC096632.1-201ENST00000427395 310 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 GTF2IP3-201ENST00000433887 494 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.7□□□□□ -1.82
GABPAQ06546 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.7□□□□□ -1.82
GABPAQ06546 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.7□□□□□ -1.82
GABPAQ06546 AC012170.1-201ENST00000495139 359 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.7□□□□□ -1.82
GABPAQ06546 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.7□□□□□ -1.82
GABPAQ06546 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.7□□□□□ -1.82
GABPAQ06546 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.7□□□□□ -1.82
GABPAQ06546 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.7□□□□□ -1.82
GABPAQ06546 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.7□□□□□ -1.82
GABPAQ06546 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.7□□□□□ -1.82
GABPAQ06546 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.7□□□□□ -1.82
GABPAQ06546 AC007566.2-201ENST00000603642 413 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 AL033523.1-201ENST00000605153 153 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.7□□□□□ -1.82
GABPAQ06546 AC104763.3-201ENST00000613765 618 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GABPAQ06546 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.7□□□□□ -1.82
GABPAQ06546 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GABPAQ06546 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
GABPAQ06546 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GABPAQ06546 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
GABPAQ06546 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GABPAQ06546 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.7□□□□□ -1.82
GABPAQ06546 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.7□□□□□ -1.82
GABPAQ06546 OR5BR1P-201ENST00000524992 1330 ntBASIC3.7□□□□□ -1.82
GABPAQ06546 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.69□□□□□ -1.82
GABPAQ06546 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
GABPAQ06546 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GABPAQ06546 HMGB1P5-201ENST00000255320 642 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 OR1S2-201ENST00000302592 978 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GABPAQ06546 RNU5E-10P-201ENST00000363506 118 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 RNU6-1226P-201ENST00000384317 107 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AL121978.1-201ENST00000402778 359 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
GABPAQ06546 RNA5SP31-201ENST00000411144 127 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 RPS3AP9-201ENST00000417027 792 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.69□□□□□ -1.82
GABPAQ06546 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.69□□□□□ -1.82
GABPAQ06546 CKS1BP5-201ENST00000434172 273 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 B3GNT2P1-201ENST00000434960 952 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 RPL23AP33-201ENST00000442301 452 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AC016696.1-201ENST00000446949 318 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 COX6CP18-201ENST00000448769 222 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.69□□□□□ -1.82
GABPAQ06546 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.69□□□□□ -1.82
GABPAQ06546 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.69□□□□□ -1.82
GABPAQ06546 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.69□□□□□ -1.82
GABPAQ06546 HIGD1AP3-201ENST00000515857 278 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 SNORA70.14-201ENST00000516205 110 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 Vault.1-201ENST00000516474 102 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AP001636.2-201ENST00000525517 696 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
GABPAQ06546 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.69□□□□□ -1.82
GABPAQ06546 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.69□□□□□ -1.82
GABPAQ06546 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AL137843.1-201ENST00000605078 385 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AC024060.1-201ENST00000607052 494 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AC009237.15-201ENST00000610252 501 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GABPAQ06546 ATP5A1P2-202ENST00000616464 443 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AC104985.3-201ENST00000623479 597 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AC004943.3-201ENST00000624116 600 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 AC073476.4-201ENST00000628409 72 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.69□□□□□ -1.82
GABPAQ06546 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GABPAQ06546 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
GABPAQ06546 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.69□□□□□ -1.82
GABPAQ06546 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.68□□□□□ -1.82
GABPAQ06546 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GABPAQ06546 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GABPAQ06546 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.68□□□□□ -1.82
GABPAQ06546 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
GABPAQ06546 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
GABPAQ06546 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.68□□□□□ -1.82
GABPAQ06546 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
GABPAQ06546 ZNF807-201ENST00000328088 1707 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 OR5H2-201ENST00000355273 945 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
GABPAQ06546 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
GABPAQ06546 RNU6-356P-201ENST00000384140 107 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 MIR217-201ENST00000384817 110 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 MIR649-201ENST00000384843 97 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AL122016.1-201ENST00000403365 367 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AL079342.2-201ENST00000403367 482 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.68□□□□□ -1.82
GABPAQ06546 AL136133.1-201ENST00000413694 376 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 FCF1P2-201ENST00000415284 583 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC013410.2-201ENST00000422627 201 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 AC092832.1-201ENST00000422934 400 ntBASIC3.68□□□□□ -1.82
GABPAQ06546 Z93242.1-201ENST00000427102 353 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms