Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC006133.1-201ENST00000617106 264 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC008443.7-201ENST00000622195 246 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 MIR4727-201ENST00000622232 55 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC034229.5-201ENST00000624258 185 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC092192.1-201ENST00000633154 1018 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 MTND4P26-201ENST00000415971 1359 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 KPNA2P2-201ENST00000419546 1489 ntBASIC3.97□□□□□ -1.77
SIX4Q9UIU6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SIX4Q9UIU6 AC025125.1-201ENST00000624743 1922 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 Y_RNA.18-201ENST00000362461 102 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 RNU6-216P-201ENST00000363282 104 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 TPMTP3-201ENST00000411928 735 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 USP9YP33-201ENST00000412220 421 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC008280.1-201ENST00000418851 412 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 USP9YP35-201ENST00000435696 412 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC241584.1-201ENST00000438469 1241 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 Z95327.1-201ENST00000446082 482 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AP000936.2-201ENST00000447151 681 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 MTND2P19-201ENST00000449129 1012 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 SLC31A1P1-201ENST00000451221 567 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AL121877.1-201ENST00000453704 622 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 MTCYBP17-201ENST00000503579 789 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 RN7SKP96-201ENST00000516948 297 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC024909.2-201ENST00000553035 286 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 MTCYBP28-201ENST00000566728 1132 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 ROCK1P1-201ENST00000573767 549 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 MIR1254-2-201ENST00000579553 63 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC064872.1-201ENST00000604823 1072 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC024560.3-201ENST00000608482 349 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AP001521.1-201ENST00000609150 300 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AL158063.1-201ENST00000615349 536 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AP000553.6-201ENST00000641242 118 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 MTND5P24-201ENST00000438892 1767 ntBASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SIX4Q9UIU6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC107081.3-201ENST00000612715 2034 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AL672167.1-206ENST00000356293 943 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 HMGN2P8-201ENST00000391458 268 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AL121978.1-201ENST00000402778 359 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 RNA5SP239-201ENST00000410218 129 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 RPL7P8-201ENST00000411964 730 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 RPL21P109-201ENST00000422213 475 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 MTCO3P5-201ENST00000433620 714 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 GOT2P5-201ENST00000433995 546 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 MTCYBP39-201ENST00000437562 491 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AF228730.2-201ENST00000438784 848 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 ZNF114P1-201ENST00000453500 292 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 ARPC3P2-201ENST00000457786 533 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC013828.1-201ENST00000481845 158 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC068724.1-201ENST00000487100 792 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC108078.3-201ENST00000502633 489 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC106038.2-201ENST00000520706 568 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC060788.1-201ENST00000521318 469 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 HIGD1AP10-201ENST00000527837 282 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 AC092851.1-201ENST00000535964 478 ntBASIC3.95□□□□□ -1.78
SIX4Q9UIU6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms