Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC005332.10-201ENST00000612725 619 ntBASIC3.94□□□□□ -1.78
PKP4Q99569 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.94□□□□□ -1.78
PKP4Q99569 AC015540.1-201ENST00000615828 501 ntBASIC3.94□□□□□ -1.78
PKP4Q99569 AC018755.4-201ENST00000619715 454 ntBASIC3.94□□□□□ -1.78
PKP4Q99569 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.94□□□□□ -1.78
PKP4Q99569 AL773545.4-201ENST00000637262 310 ntBASIC3.94□□□□□ -1.78
PKP4Q99569 MIR492-201ENST00000638676 116 ntBASIC3.94□□□□□ -1.78
PKP4Q99569 AL513478.4-201ENST00000641636 310 ntBASIC3.94□□□□□ -1.78
PKP4Q99569 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PKP4Q99569 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PKP4Q99569 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.94□□□□□ -1.78
PKP4Q99569 AC116096.1-201ENST00000566804 2314 ntBASIC3.94□□□□□ -1.78
PKP4Q99569 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.94□□□□□ -1.78
PKP4Q99569 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.94□□□□□ -1.78
PKP4Q99569 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.94□□□□□ -1.78
PKP4Q99569 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PKP4Q99569 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 Y_RNA.18-201ENST00000362461 102 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 RNU4-21P-201ENST00000362802 126 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 SNORA4.1-201ENST00000364263 144 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 RNU6-335P-201ENST00000364563 113 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 RNU6-921P-201ENST00000384361 107 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 MIR649-201ENST00000384843 97 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 MIR607-201ENST00000385241 96 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 RNU6-1300P-201ENST00000391046 108 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 RN7SKP142-201ENST00000411236 328 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.93□□□□□ -1.78
PKP4Q99569 AL356095.1-201ENST00000417217 199 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.93□□□□□ -1.78
PKP4Q99569 RPL31P54-201ENST00000429803 370 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.93□□□□□ -1.78
PKP4Q99569 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 RPL7P28-201ENST00000437739 740 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.93□□□□□ -1.78
PKP4Q99569 AC092641.1-201ENST00000440229 772 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.93□□□□□ -1.78
PKP4Q99569 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.93□□□□□ -1.78
PKP4Q99569 RPS7P7-201ENST00000463499 571 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AC072039.1-201ENST00000477611 581 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AC068587.1-201ENST00000483613 781 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.93□□□□□ -1.78
PKP4Q99569 AC022447.1-201ENST00000515358 464 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 SNORA70.14-201ENST00000516205 110 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 RN7SKP31-201ENST00000516354 278 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AP002963.1-201ENST00000530590 184 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.93□□□□□ -1.78
PKP4Q99569 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.93□□□□□ -1.78
PKP4Q99569 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.93□□□□□ -1.78
PKP4Q99569 MTATP6P3-201ENST00000581686 676 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 AC022146.1-201ENST00000595307 847 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 SNRPGP15-201ENST00000600149 222 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AC079089.3-201ENST00000603094 673 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AL139395.1-201ENST00000603662 160 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 MIR6867-201ENST00000610636 67 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 MIR6868-201ENST00000611215 58 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AC023043.4-201ENST00000612081 449 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 AC099842.1-201ENST00000619919 596 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AL031667.3-201ENST00000620124 655 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 AC073348.1-201ENST00000623002 331 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.93□□□□□ -1.78
PKP4Q99569 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 AC117529.2-201ENST00000512159 2068 ntBASIC3.93□□□□□ -1.78
PKP4Q99569 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.93□□□□□ -1.78
PKP4Q99569 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.93□□□□□ -1.78
PKP4Q99569 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKP4Q99569 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.93□□□□□ -1.78
PKP4Q99569 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
PKP4Q99569 AC097504.1-201ENST00000515103 2415 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.92□□□□□ -1.78
PKP4Q99569 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 RNU5D-1-201ENST00000363299 116 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AL121972.1-201ENST00000402023 252 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 RNU2-37P-201ENST00000410695 177 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 RNU2-42P-201ENST00000410697 113 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 RNU2-16P-201ENST00000410712 136 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 TPMTP3-201ENST00000411928 735 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 RSL24D1P6-201ENST00000426934 401 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.92□□□□□ -1.78
PKP4Q99569 AC091390.1-201ENST00000433904 331 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.92□□□□□ -1.78
PKP4Q99569 RPS25P9-201ENST00000435591 252 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms