Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 RNA5SP76-201ENST00000516277 87 ntBASIC3.09□□□□□ -1.91
CACNA1SQ13698 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.09□□□□□ -1.91
CACNA1SQ13698 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.09□□□□□ -1.91
CACNA1SQ13698 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.09□□□□□ -1.91
CACNA1SQ13698 AC022069.1-201ENST00000582910 658 ntBASIC3.09□□□□□ -1.91
CACNA1SQ13698 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.09□□□□□ -1.91
CACNA1SQ13698 GABPAP-201ENST00000419271 1356 ntBASIC3.09□□□□□ -1.91
CACNA1SQ13698 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CACNA1SQ13698 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CACNA1SQ13698 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.09□□□□□ -1.92
CACNA1SQ13698 ST13P20-201ENST00000447996 1065 ntBASIC3.09□□□□□ -1.92
CACNA1SQ13698 AC068587.2-201ENST00000478386 781 ntBASIC3.09□□□□□ -1.92
CACNA1SQ13698 AC108860.1-201ENST00000484521 383 ntBASIC3.09□□□□□ -1.92
CACNA1SQ13698 AC108210.2-201ENST00000503681 201 ntBASIC3.09□□□□□ -1.92
CACNA1SQ13698 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.09□□□□□ -1.92
CACNA1SQ13698 AC234781.5-201ENST00000508429 271 ntBASIC3.09□□□□□ -1.92
CACNA1SQ13698 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.09□□□□□ -1.92
CACNA1SQ13698 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.09□□□□□ -1.92
CACNA1SQ13698 AP001207.1-201ENST00000524051 481 ntBASIC3.09□□□□□ -1.92
CACNA1SQ13698 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.09□□□□□ -1.92
CACNA1SQ13698 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.09□□□□□ -1.92
CACNA1SQ13698 TRAV37-201ENST00000553906 342 ntBASIC3.09□□□□□ -1.92
CACNA1SQ13698 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.09□□□□□ -1.92
CACNA1SQ13698 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CACNA1SQ13698 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CACNA1SQ13698 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 RPL31P45-201ENST00000419532 356 ntBASIC3.08□□□□□ -1.92
CACNA1SQ13698 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 AC022616.2-201ENST00000523185 300 ntBASIC3.08□□□□□ -1.92
CACNA1SQ13698 AC019227.1-201ENST00000526902 510 ntBASIC3.08□□□□□ -1.92
CACNA1SQ13698 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 AC099063.3-201ENST00000642066 185 ntBASIC3.08□□□□□ -1.92
CACNA1SQ13698 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CACNA1SQ13698 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.08□□□□□ -1.92
CACNA1SQ13698 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CACNA1SQ13698 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CACNA1SQ13698 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CACNA1SQ13698 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CACNA1SQ13698 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CACNA1SQ13698 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC009965.2-201ENST00000425328 970 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 MTCYBP29-201ENST00000436327 1006 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 RPL21P18-201ENST00000469899 480 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC103975.1-201ENST00000482506 483 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 AP004242.1-201ENST00000533701 349 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC107871.2-201ENST00000612894 502 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CACNA1SQ13698 MIR4278-201ENST00000636094 69 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CACNA1SQ13698 RNU6-253P-201ENST00000384730 105 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 EI24P2-201ENST00000397776 1076 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC007064.1-201ENST00000412238 351 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 RPL9P33-201ENST00000484311 566 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.07□□□□□ -1.92
CACNA1SQ13698 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 CRYM-AS1-204ENST00000637983 556 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 AC009487.2-201ENST00000420969 6821 ntBASIC3.07□□□□□ -1.92
CACNA1SQ13698 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CACNA1SQ13698 AC097714.1-201ENST00000511272 1647 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 USP9YP20-201ENST00000419224 558 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 RPL23AP45-201ENST00000476406 468 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 GAPDHP39-201ENST00000481866 979 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 AC010627.1-201ENST00000503819 1294 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CACNA1SQ13698 AC108120.2-201ENST00000512973 294 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 ACTR6P1-201ENST00000514311 1104 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 Y_RNA.676-201ENST00000516393 96 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 SEC11B-201ENST00000518383 499 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 RPL23AP84-201ENST00000571193 464 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 NTAN1P1-201ENST00000603150 646 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 GMCL1P2-201ENST00000605230 823 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 AL450489.1-201ENST00000612071 468 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.06□□□□□ -1.92
CACNA1SQ13698 U6.98-201ENST00000637157 84 ntBASIC3.06□□□□□ -1.92
CACNA1SQ13698 AC069528.2-201ENST00000624849 1991 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms