Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.94□□□□□ -1.78
HMGXB3Q12766 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGXB3Q12766 BX664608.1-201ENST00000610519 487 ntBASIC3.94□□□□□ -1.78
HMGXB3Q12766 AC010378.1-201ENST00000619270 362 ntBASIC3.94□□□□□ -1.78
HMGXB3Q12766 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGXB3Q12766 AL356266.1-201ENST00000623311 483 ntBASIC3.94□□□□□ -1.78
HMGXB3Q12766 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGXB3Q12766 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGXB3Q12766 RNU1-87P-201ENST00000363727 170 ntBASIC3.93□□□□□ -1.78
HMGXB3Q12766 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HMGXB3Q12766 CYCSP49-201ENST00000420810 319 ntBASIC3.93□□□□□ -1.78
HMGXB3Q12766 RPL36AP21-201ENST00000490372 323 ntBASIC3.93□□□□□ -1.78
HMGXB3Q12766 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGXB3Q12766 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGXB3Q12766 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGXB3Q12766 AC012078.1-201ENST00000405035 1646 ntBASIC3.93□□□□□ -1.78
HMGXB3Q12766 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HMGXB3Q12766 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGXB3Q12766 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGXB3Q12766 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
HMGXB3Q12766 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HMGXB3Q12766 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGXB3Q12766 RNU6-14P-201ENST00000384630 106 ntBASIC3.92□□□□□ -1.78
HMGXB3Q12766 AL139156.1-201ENST00000412785 841 ntBASIC3.92□□□□□ -1.78
HMGXB3Q12766 AC048351.1-201ENST00000420064 602 ntBASIC3.92□□□□□ -1.78
HMGXB3Q12766 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGXB3Q12766 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGXB3Q12766 OR9N1P-201ENST00000491296 333 ntBASIC3.92□□□□□ -1.78
HMGXB3Q12766 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGXB3Q12766 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.92□□□□□ -1.78
HMGXB3Q12766 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGXB3Q12766 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGXB3Q12766 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGXB3Q12766 AC093591.3-201ENST00000634516 308 ntBASIC3.92□□□□□ -1.78
HMGXB3Q12766 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGXB3Q12766 AC009501.3-201ENST00000605001 1352 ntBASIC3.92□□□□□ -1.78
HMGXB3Q12766 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGXB3Q12766 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HMGXB3Q12766 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HMGXB3Q12766 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.91□□□□□ -1.78
HMGXB3Q12766 AL450338.1-201ENST00000407987 512 ntBASIC3.91□□□□□ -1.78
HMGXB3Q12766 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGXB3Q12766 AC108667.1-201ENST00000428618 249 ntBASIC3.91□□□□□ -1.78
HMGXB3Q12766 AC098826.1-201ENST00000433943 471 ntBASIC3.91□□□□□ -1.78
HMGXB3Q12766 RPL36AP33-201ENST00000450395 310 ntBASIC3.91□□□□□ -1.78
HMGXB3Q12766 MIR8070-201ENST00000616510 88 ntBASIC3.91□□□□□ -1.78
HMGXB3Q12766 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGXB3Q12766 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.91□□□□□ -1.78
HMGXB3Q12766 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.9□□□□□ -1.78
HMGXB3Q12766 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.9□□□□□ -1.78
HMGXB3Q12766 AC002553.2-201ENST00000453217 340 ntBASIC3.9□□□□□ -1.78
HMGXB3Q12766 RNU6-1053P-201ENST00000515930 101 ntBASIC3.9□□□□□ -1.78
HMGXB3Q12766 GNAI2P1-201ENST00000541815 315 ntBASIC3.9□□□□□ -1.78
HMGXB3Q12766 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.9□□□□□ -1.78
HMGXB3Q12766 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.9□□□□□ -1.78
HMGXB3Q12766 AC128687.1-201ENST00000605304 619 ntBASIC3.9□□□□□ -1.78
HMGXB3Q12766 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGXB3Q12766 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGXB3Q12766 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGXB3Q12766 RNU6-1140P-201ENST00000410517 106 ntBASIC3.9□□□□□ -1.79
HMGXB3Q12766 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGXB3Q12766 AC245517.2-201ENST00000442890 346 ntBASIC3.9□□□□□ -1.79
HMGXB3Q12766 AC091917.2-201ENST00000505002 744 ntBASIC3.9□□□□□ -1.79
HMGXB3Q12766 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGXB3Q12766 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGXB3Q12766 AC093673.2-201ENST00000609674 331 ntBASIC3.9□□□□□ -1.79
HMGXB3Q12766 AC131238.1-201ENST00000617135 328 ntBASIC3.9□□□□□ -1.79
HMGXB3Q12766 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGXB3Q12766 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGXB3Q12766 HMGB1P11-201ENST00000413899 637 ntBASIC3.89□□□□□ -1.79
HMGXB3Q12766 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGXB3Q12766 AC023043.2-201ENST00000589678 1026 ntBASIC3.89□□□□□ -1.79
HMGXB3Q12766 AC012119.1-201ENST00000603184 222 ntBASIC3.89□□□□□ -1.79
HMGXB3Q12766 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGXB3Q12766 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGXB3Q12766 AL136964.1-201ENST00000622038 2990 ntBASIC3.88□□□□□ -1.79
HMGXB3Q12766 Y_RNA.508-201ENST00000384502 114 ntBASIC3.88□□□□□ -1.79
HMGXB3Q12766 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HMGXB3Q12766 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGXB3Q12766 TRBV26-201ENST00000456572 344 ntBASIC3.88□□□□□ -1.79
HMGXB3Q12766 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGXB3Q12766 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGXB3Q12766 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGXB3Q12766 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGXB3Q12766 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGXB3Q12766 MIR4781-201ENST00000585250 76 ntBASIC3.88□□□□□ -1.79
HMGXB3Q12766 AC245517.5-201ENST00000611529 162 ntBASIC3.88□□□□□ -1.79
HMGXB3Q12766 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGXB3Q12766 AC097714.1-201ENST00000511272 1647 ntBASIC3.88□□□□□ -1.79
HMGXB3Q12766 RAD1P1-201ENST00000231383 813 ntBASIC3.87□□□□□ -1.79
HMGXB3Q12766 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGXB3Q12766 SNORA67.3-201ENST00000384366 140 ntBASIC3.87□□□□□ -1.79
HMGXB3Q12766 MIR3074-201ENST00000384885 81 ntBASIC3.87□□□□□ -1.79
HMGXB3Q12766 SNORA11.4-201ENST00000408823 129 ntBASIC3.87□□□□□ -1.79
HMGXB3Q12766 AC021146.5-201ENST00000503544 545 ntBASIC3.87□□□□□ -1.79
HMGXB3Q12766 AP003467.2-201ENST00000520175 319 ntBASIC3.87□□□□□ -1.79
HMGXB3Q12766 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGXB3Q12766 AC008432.1-201ENST00000615912 1320 ntBASIC3.87□□□□□ -1.79
HMGXB3Q12766 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HMGXB3Q12766 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms