Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX3O60493 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX3O60493 MIR4715-201ENST00000584117 79 ntBASIC3.54□□□□□ -1.84
SNX3O60493 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.54□□□□□ -1.84
SNX3O60493 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX3O60493 AC080013.4-201ENST00000607624 649 ntBASIC3.54□□□□□ -1.84
SNX3O60493 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX3O60493 MIR7703-201ENST00000620784 77 ntBASIC3.54□□□□□ -1.84
SNX3O60493 AC004009.2-201ENST00000623016 728 ntBASIC3.54□□□□□ -1.84
SNX3O60493 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SNX3O60493 AC090337.1-201ENST00000579651 2074 ntBASIC3.54□□□□□ -1.84
SNX3O60493 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNX3O60493 AC104454.1-201ENST00000421341 1401 ntBASIC3.53□□□□□ -1.84
SNX3O60493 OR4G11P-202ENST00000642116 1414 ntBASIC3.53□□□□□ -1.84
SNX3O60493 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX3O60493 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX3O60493 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX3O60493 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SNX3O60493 RNA5SP258-201ENST00000362750 119 ntBASIC3.53□□□□□ -1.84
SNX3O60493 RNA5SP383-201ENST00000362934 120 ntBASIC3.53□□□□□ -1.84
SNX3O60493 RNU6-931P-201ENST00000363850 107 ntBASIC3.53□□□□□ -1.84
SNX3O60493 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX3O60493 RNU6-629P-201ENST00000384061 103 ntBASIC3.53□□□□□ -1.84
SNX3O60493 U1.1-201ENST00000384101 164 ntBASIC3.53□□□□□ -1.84
SNX3O60493 RNU6-837P-201ENST00000391056 108 ntBASIC3.53□□□□□ -1.84
SNX3O60493 RNA5SP239-201ENST00000410218 129 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX3O60493 RPL7P30-201ENST00000420888 709 ntBASIC3.53□□□□□ -1.84
SNX3O60493 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX3O60493 DNAJC19P7-201ENST00000428811 344 ntBASIC3.53□□□□□ -1.84
SNX3O60493 BRWD1P3-201ENST00000428816 390 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX3O60493 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX3O60493 EEF1E1P1-201ENST00000446998 430 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC104978.1-201ENST00000449387 391 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX3O60493 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX3O60493 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX3O60493 HMGB1P25-201ENST00000468402 607 ntBASIC3.53□□□□□ -1.84
SNX3O60493 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX3O60493 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX3O60493 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX3O60493 IGKV2-23-201ENST00000518729 323 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX3O60493 AC022861.1-201ENST00000522981 663 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX3O60493 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX3O60493 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX3O60493 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX3O60493 EEF1B2P4-201ENST00000551398 348 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX3O60493 AC006270.2-201ENST00000578523 652 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC010928.3-201ENST00000587712 541 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX3O60493 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.53□□□□□ -1.84
SNX3O60493 AL353778.1-201ENST00000603149 408 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC004987.4-201ENST00000603383 338 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AL139344.1-201ENST00000605228 195 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC011816.2-201ENST00000607089 556 ntBASIC3.53□□□□□ -1.84
SNX3O60493 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX3O60493 AC018755.4-201ENST00000619715 454 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AL607023.1-201ENST00000620045 248 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC004943.3-201ENST00000624116 600 ntBASIC3.53□□□□□ -1.84
SNX3O60493 AC097520.1-201ENST00000624435 385 ntBASIC3.53□□□□□ -1.84
SNX3O60493 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX3O60493 AP000553.6-201ENST00000641242 118 ntBASIC3.53□□□□□ -1.84
SNX3O60493 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX3O60493 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX3O60493 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SNX3O60493 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SNX3O60493 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX3O60493 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SNX3O60493 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX3O60493 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.52□□□□□ -1.85
SNX3O60493 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX3O60493 AP000526.1-201ENST00000603308 1388 ntBASIC3.52□□□□□ -1.85
SNX3O60493 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.52□□□□□ -1.85
SNX3O60493 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX3O60493 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX3O60493 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX3O60493 SGO1P2-201ENST00000429458 1589 ntBASIC3.52□□□□□ -1.85
SNX3O60493 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.52□□□□□ -1.85
SNX3O60493 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX3O60493 OR5H2-201ENST00000355273 945 ntBASIC3.52□□□□□ -1.85
SNX3O60493 MIR148B-201ENST00000362252 99 ntBASIC3.52□□□□□ -1.85
SNX3O60493 RNU6-1249P-201ENST00000363237 111 ntBASIC3.52□□□□□ -1.85
SNX3O60493 SNORD56.3-201ENST00000363507 71 ntBASIC3.52□□□□□ -1.85
SNX3O60493 RNA5SP509-201ENST00000364577 119 ntBASIC3.52□□□□□ -1.85
SNX3O60493 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SNX3O60493 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SNX3O60493 RNU6-952P-201ENST00000391164 108 ntBASIC3.52□□□□□ -1.85
SNX3O60493 ATP5F1P3-201ENST00000397213 657 ntBASIC3.52□□□□□ -1.85
SNX3O60493 TPMTP2-201ENST00000414372 726 ntBASIC3.52□□□□□ -1.85
SNX3O60493 HMGB3P23-201ENST00000414981 585 ntBASIC3.52□□□□□ -1.85
SNX3O60493 AC119751.6-201ENST00000416712 186 ntBASIC3.52□□□□□ -1.85
SNX3O60493 COX6CP17-201ENST00000421389 185 ntBASIC3.52□□□□□ -1.85
SNX3O60493 RPL23AP38-201ENST00000423801 469 ntBASIC3.52□□□□□ -1.85
SNX3O60493 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms