Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RN7SL330P-201ENST00000469709 307 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AP000563.1-201ENST00000490865 758 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A1O00337 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A1O00337 AC114322.1-201ENST00000506771 926 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A1O00337 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
SLC28A1O00337 AC008837.2-201ENST00000513076 418 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC026402.1-201ENST00000513642 170 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 MTCO2P32-201ENST00000514865 403 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A1O00337 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A1O00337 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A1O00337 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
SLC28A1O00337 HSPE1P5-201ENST00000561489 272 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A1O00337 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A1O00337 RN7SL703P-201ENST00000578485 302 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 MAGOH2P-202ENST00000584384 429 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 BNIP3P26-201ENST00000600827 554 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC012669.1-201ENST00000603209 283 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC069304.2-201ENST00000605154 435 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC016877.3-201ENST00000606778 504 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A1O00337 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SLC28A1O00337 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A1O00337 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A1O00337 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A1O00337 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A1O00337 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A1O00337 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A1O00337 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A1O00337 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A1O00337 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.4□□□□□ -1.86
SLC28A1O00337 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SLC28A1O00337 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SLC28A1O00337 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SLC28A1O00337 RNU6-560P-201ENST00000364007 108 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A1O00337 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC28A1O00337 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A1O00337 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A1O00337 RNU6-55P-201ENST00000411092 107 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 Y_RNA.625-201ENST00000411256 107 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 RNU6-954P-201ENST00000411355 107 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A1O00337 AL049610.1-201ENST00000423374 372 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A1O00337 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A1O00337 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC28A1O00337 AL050321.1-201ENST00000432363 400 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC28A1O00337 RPL7P52-201ENST00000449200 742 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 ZNF886P-201ENST00000450781 723 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.4□□□□□ -1.87
SLC28A1O00337 PTGES3P5-201ENST00000455109 434 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A1O00337 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC28A1O00337 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.4□□□□□ -1.87
SLC28A1O00337 SCARNA1-201ENST00000517138 166 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A1O00337 AC018630.1-201ENST00000541376 925 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.4□□□□□ -1.87
SLC28A1O00337 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 SYF2P1-201ENST00000550658 413 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 HSPE1P3-201ENST00000559254 309 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 AC022916.3-201ENST00000592961 742 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 AC243773.3-201ENST00000613270 256 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.4□□□□□ -1.87
SLC28A1O00337 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC28A1O00337 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SLC28A1O00337 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC28A1O00337 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A1O00337 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A1O00337 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC28A1O00337 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AP002907.1-201ENST00000606361 1430 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 MIR30E-201ENST00000362104 92 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 RNU6-50P-201ENST00000362356 103 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 RNU4-68P-201ENST00000364314 141 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
SLC28A1O00337 RNU6-1074P-201ENST00000383995 104 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 SNORD3H-201ENST00000384486 214 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 RNA5SP129-201ENST00000410276 118 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 RN7SKP53-201ENST00000411337 315 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 AC068533.2-201ENST00000411872 306 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AL356320.2-201ENST00000417263 507 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 AC019178.2-201ENST00000423595 505 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 RPS29P7-201ENST00000439662 171 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 AC004854.1-201ENST00000440356 349 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 Z95327.1-201ENST00000446082 482 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AC005410.1-202ENST00000460347 485 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 UBE2CP3-201ENST00000502715 450 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms