Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 snoU13.1-201ENST00000459157 104 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 RPL23AP56-201ENST00000460778 453 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 RPL7AP28-201ENST00000464513 571 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 RPL23AP53-201ENST00000521854 457 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 CR383656.7-201ENST00000548164 174 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AL161734.1-201ENST00000609720 557 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC090970.3-201ENST00000612566 866 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AL136964.1-201ENST00000622038 2990 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC018529.3-201ENST00000624212 2254 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 AC244517.1-201ENST00000606030 2086 ntBASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHGA3Q9Y5H0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 MTCO1P9-201ENST00000505577 1534 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 DHX40P1-201ENST00000588725 1412 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 SNORA70.10-201ENST00000384515 134 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 RNA5SP332-201ENST00000391063 115 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 GSTA9P-201ENST00000406231 611 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 CCDC58P2-201ENST00000417131 366 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC009480.2-201ENST00000422916 432 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AL589872.1-201ENST00000426602 288 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 MTND4LP10-201ENST00000435146 291 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 RPL35AP22-201ENST00000436855 335 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 PSPHP1-201ENST00000450062 261 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 MTCO2P29-201ENST00000465212 189 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC004924.1-201ENST00000480160 781 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC055855.1-201ENST00000489563 579 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AF213884.2-201ENST00000510417 903 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 RN7SKP244-201ENST00000516513 307 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC006254.3-201ENST00000603353 884 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 RBM11P1-201ENST00000604951 799 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AC098614.4-201ENST00000607601 462 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 SNORD91B-202ENST00000608459 222 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 AL049794.2-201ENST00000616301 365 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 SALL4P2-201ENST00000423288 2910 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA3Q9Y5H0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 OR4K15-201ENST00000305051 1216 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RN7SKP226-201ENST00000364912 300 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 MIR124-3-201ENST00000384866 87 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RNU2-62P-201ENST00000410868 191 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 RPS12P23-201ENST00000419579 400 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 AL137014.1-201ENST00000420490 1226 ntBASIC4.66□□□□□ -1.66
PCDHGA3Q9Y5H0 CHIAP3-201ENST00000423668 1133 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms