Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 EIF5A2P1-201ENST00000564027 460 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 BDH2P1-201ENST00000602288 736 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AL118508.4-201ENST00000624142 1176 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AP003400.6-201ENST00000624698 740 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AL109659.3-201ENST00000624985 950 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 RNU6-796P-201ENST00000391086 107 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 RNU6-1077P-201ENST00000410506 102 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 MRPL50P2-201ENST00000416821 482 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 SNRPEP4-201ENST00000435815 279 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 MTND2P3-201ENST00000452458 470 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 RPL21P41-201ENST00000459863 264 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 PRELID3BP6-201ENST00000503839 571 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC133963.2-201ENST00000513686 578 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 RNU6-202P-201ENST00000515998 96 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC034105.3-201ENST00000565294 442 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC107954.1-201ENST00000565906 727 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 MTCYBP28-201ENST00000566728 1132 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC055876.1-202ENST00000567053 138 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 SNORD84-203ENST00000584275 78 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 OR2BH1P-201ENST00000608850 864 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC073569.3-201ENST00000619055 682 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC244100.1-202ENST00000621554 382 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 AC092608.3-201ENST00000625017 386 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 GABRG2-229ENST00000641017 3628 ntBASIC2.98□□□□□ -1.93
TREX1Q9NSU2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TREX1Q9NSU2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 API5P2-201ENST00000397055 1498 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC008264.2-201ENST00000610193 3731 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 MIR525-201ENST00000384978 85 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 SNORA11C-201ENST00000408532 129 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 U3.42-201ENST00000408746 214 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC012498.1-201ENST00000424037 437 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 RSL24D1P8-201ENST00000434442 492 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC010285.1-201ENST00000470580 392 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 RPS23P3-201ENST00000470993 430 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AL136126.1-201ENST00000473603 402 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC017015.1-201ENST00000477387 286 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC068724.1-201ENST00000487100 792 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 HMGB1P22-201ENST00000505315 124 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 SNORA31.26-201ENST00000517250 137 ntBASIC2.97□□□□□ -1.93
TREX1Q9NSU2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.97□□□□□ -1.93
TREX1Q9NSU2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms