Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC015813.6-201ENST00000624409 5808 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC017104.4-201ENST00000636283 1592 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 RNU1-94P-201ENST00000362627 173 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 RNA5SP258-201ENST00000362750 119 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 RNU6-343P-201ENST00000364709 104 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 RNU6-297P-201ENST00000384636 107 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 RN7SKP27-201ENST00000410684 333 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC007742.1-201ENST00000425789 329 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 MTND1P4-201ENST00000435196 415 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 ELOCP26-201ENST00000436067 329 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC127537.2-201ENST00000439258 465 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AL450263.2-201ENST00000439400 589 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC108734.1-201ENST00000439549 399 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 DNAJC19P4-201ENST00000440115 345 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 HSFY6P-201ENST00000445573 403 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC098824.1-201ENST00000453565 980 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC126182.1-201ENST00000478134 357 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 RN7SL691P-201ENST00000494487 301 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 RNU6-714P-201ENST00000516963 103 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 RN7SKP234-201ENST00000517173 224 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 MTCO2P4-201ENST00000517968 247 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 RPL21P5-201ENST00000554662 472 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 AC091178.1-203ENST00000584586 279 ntBASIC4.97□□□□□ -1.61
VTA1Q9NP79 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VTA1Q9NP79 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.97□□□□□ -1.61
VTA1Q9NP79 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
VTA1Q9NP79 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VTA1Q9NP79 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
VTA1Q9NP79 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VTA1Q9NP79 DDX18P3-201ENST00000404856 2007 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 LARP1BP1-201ENST00000506036 1359 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 SNORA37-201ENST00000384504 129 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 Y_RNA.516-201ENST00000384541 124 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 AL356421.1-201ENST00000403255 413 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 ISCA1P1-201ENST00000426679 387 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 AL031667.1-201ENST00000440222 725 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 MTND6P13-201ENST00000443510 523 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 PTMAP3-201ENST00000447474 330 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 RPL7P52-201ENST00000449200 742 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 RPS20P24-201ENST00000457473 361 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 RPL23AP41-201ENST00000484754 458 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 AL358832.1-201ENST00000497800 389 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 AC074050.1-201ENST00000563247 211 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 HNRNPCP4-201ENST00000571636 900 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 HMGB2P1-201ENST00000591146 634 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 AC025588.3-201ENST00000604182 274 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 RBM11P1-201ENST00000604951 799 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 RNU6-87P-201ENST00000607561 108 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 AC105429.2-201ENST00000610567 517 ntBASIC4.96□□□□□ -1.62
VTA1Q9NP79 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
VTA1Q9NP79 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VTA1Q9NP79 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VTA1Q9NP79 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VTA1Q9NP79 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VTA1Q9NP79 MTND5P26-201ENST00000426018 1752 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms