Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 IGLVIV-65-201ENST00000517313 360 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 NARSP2-201ENST00000518524 679 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AP004247.1-201ENST00000531556 1289 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC109635.4-202ENST00000531666 412 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC013828.2-201ENST00000532487 235 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC018630.1-201ENST00000541376 925 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC006064.5-201ENST00000541782 248 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 GTF2IP22-201ENST00000554443 182 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 MIR3915-201ENST00000578518 97 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AP001004.1-201ENST00000582468 324 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 BNIP3P23-201ENST00000599655 511 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AC090948.1-201ENST00000607464 549 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AL590099.1-201ENST00000615276 138 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 MIR6891-201ENST00000618788 93 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 OR8B1P-202ENST00000641132 1178 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 USP8P1-201ENST00000494673 3183 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 AP001350.1-201ENST00000601906 1524 ntBASIC3.6□□□□□ -1.83
CHMP1AQ9HD42 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AL365440.1-201ENST00000436135 2167 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC139713.2-214ENST00000642059 1811 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 RNU6-769P-201ENST00000384407 104 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 MIR607-201ENST00000385241 96 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AL356421.1-201ENST00000403255 413 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 MIR1305-201ENST00000408300 86 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 MTCO1P17-201ENST00000411522 491 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC009518.2-201ENST00000418056 731 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 Z97055.1-201ENST00000419730 712 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AL512649.1-201ENST00000428997 581 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 ARF4P2-201ENST00000430209 526 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 RPL21P112-201ENST00000434403 463 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AF228730.2-201ENST00000438784 848 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 RPL12P3-201ENST00000440080 396 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC069499.1-201ENST00000489433 509 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC106872.3-201ENST00000495104 446 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC022447.3-201ENST00000506865 495 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC023141.12-201ENST00000512399 199 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 RN7SKP244-201ENST00000516513 307 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AP003497.1-201ENST00000528472 562 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AL109766.1-201ENST00000555080 552 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 OR4K8P-201ENST00000578842 1048 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 MIR5047-201ENST00000579212 100 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 CU459211.1-201ENST00000635667 749 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 CRYM-AS1-204ENST00000637983 556 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 MAPK10-373ENST00000641983 6772 ntBASIC3.59□□□□□ -1.83
CHMP1AQ9HD42 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CHMP1AQ9HD42 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CHMP1AQ9HD42 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.59□□□□□ -1.84
CHMP1AQ9HD42 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.59□□□□□ -1.84
CHMP1AQ9HD42 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.84
CHMP1AQ9HD42 AC092447.10-201ENST00000620607 1652 ntBASIC3.59□□□□□ -1.84
CHMP1AQ9HD42 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 AC004925.1-201ENST00000624256 2706 ntBASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP1AQ9HD42 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms