Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC093878.1-201ENST00000515630 432 ntBASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 Y_RNA.797-201ENST00000515977 94 ntBASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 AC002310.3-201ENST00000569728 723 ntBASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 RN7SL178P-201ENST00000582930 304 ntBASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 B3GNTL1P2-201ENST00000603673 288 ntBASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 AL352984.2-202ENST00000613699 155 ntBASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 AC116667.1-201ENST00000604855 2072 ntBASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCAF1Q9H7N4 RPL24P7-201ENST00000399435 453 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 AC007679.3-201ENST00000434035 414 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 RPL23AP3-201ENST00000453844 468 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 Y_RNA.712-201ENST00000517011 92 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 EDDM3DP-201ENST00000554692 434 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 RN7SL652P-201ENST00000577769 300 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 MIR4502-201ENST00000580432 81 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 BPIFA4P-203ENST00000603168 689 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 AC004852.3-201ENST00000614131 326 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 TMCC1P1-201ENST00000518897 1980 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 BTBD10P1-201ENST00000549824 1352 ntBASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
SCAF1Q9H7N4 RNU5E-7P-201ENST00000365290 117 ntBASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 Z82210.1-201ENST00000440037 231 ntBASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 FUNDC2P2-202ENST00000443452 493 ntBASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 MIR4431-201ENST00000579990 94 ntBASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 AC008521.2-201ENST00000591021 259 ntBASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 MIR15A-201ENST00000607334 83 ntBASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 AC008555.8-201ENST00000623602 2168 ntBASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 AC027575.3-201ENST00000583058 2747 ntBASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC10.1□□□□□ -0.79
SCAF1Q9H7N4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 RPL12P13-201ENST00000310055 497 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 RNU6-222P-201ENST00000362438 107 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 RNU6-294P-201ENST00000364999 102 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 SNORA77.2-201ENST00000408571 112 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 CYP4F32P-201ENST00000426492 504 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 CFL1P1-202ENST00000432948 411 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 Z82188.1-201ENST00000436709 154 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 GAPDHP25-201ENST00000447061 1001 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 RPL21P126-201ENST00000470049 478 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 RPS10P20-201ENST00000494130 463 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 RNA5SP441-201ENST00000516809 88 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 AC067852.3-201ENST00000589177 561 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 AC108081.1-201ENST00000604358 221 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 RPL23AP88-201ENST00000605759 454 ntBASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC10.09□□□□□ -0.79
SCAF1Q9H7N4 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms