Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AP002782.1-201ENST00000623107 614 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC231657.1-201ENST00000624313 397 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
UBQLN3Q9H347 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.53□□□□□ -1.85
UBQLN3Q9H347 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
UBQLN3Q9H347 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RNU6-1249P-201ENST00000363237 111 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RNU6-878P-201ENST00000384578 110 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 MIR30B-201ENST00000384850 88 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 SNORA3.3-201ENST00000408712 125 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RNU2-15P-201ENST00000410692 191 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RPS7P15-201ENST00000415804 584 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RAD23BP2-201ENST00000416003 1207 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 HMGB1P49-201ENST00000418882 569 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 PSMA6P3-201ENST00000428242 164 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 BMS1P19-201ENST00000433925 393 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AL662791.1-201ENST00000441992 928 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RPS24P6-201ENST00000452670 400 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 TRGVB-201ENST00000453257 471 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 snoU13.24-201ENST00000458998 104 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RN7SL542P-201ENST00000467147 294 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 TMEM251P1-201ENST00000503717 318 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 HMGB1P22-201ENST00000505315 124 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC010587.2-201ENST00000511727 448 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 SAP18P1-201ENST00000512058 390 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RNU6-27P-201ENST00000516146 107 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 SCARNA14-201ENST00000516903 136 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 MTCO2P15-201ENST00000532655 656 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AL121603.1-201ENST00000553815 142 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC009712.1-201ENST00000564938 316 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC245036.5-201ENST00000596330 847 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC234772.3-201ENST00000602277 528 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 RPL23AP92-201ENST00000603609 255 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC006270.3-201ENST00000605967 1036 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC244205.2-202ENST00000635781 342 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC006927.4-201ENST00000639187 543 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC005539.1-201ENST00000443768 1479 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 AC006504.1-201ENST00000562493 3666 ntBASIC3.52□□□□□ -1.85
UBQLN3Q9H347 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.52□□□□□ -1.85
UBQLN3Q9H347 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 U3.29-201ENST00000391296 212 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 HSPE1P8-201ENST00000406997 288 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC006960.1-201ENST00000419980 153 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC007389.2-201ENST00000434630 306 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 Z74696.2-201ENST00000436514 498 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 Z73417.1-201ENST00000447373 778 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC005297.2-201ENST00000450430 606 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 NANOGP10-201ENST00000453325 895 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC098824.1-201ENST00000453565 980 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 USP9YP34-201ENST00000453983 808 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 MTCO3P20-201ENST00000454926 688 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 BTF3P5-201ENST00000457252 467 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms