Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 SNORA43.4-201ENST00000629559 138 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 AC006453.3-201ENST00000635891 377 ntBASIC7.92□□□□□ -1.14
RNF39Q9H2S5 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
RNF39Q9H2S5 AC138207.6-201ENST00000579164 1967 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC139426.3-201ENST00000605648 2059 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 Y_RNA.316-201ENST00000365118 111 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC013442.1-201ENST00000397347 228 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC009362.1-201ENST00000427253 406 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC009237.8-201ENST00000445492 379 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AL049873.1-201ENST00000480540 376 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 MIR4470-201ENST00000583453 72 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC092960.1-201ENST00000604762 351 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC103988.1-201ENST00000566382 2177 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC127502.2-201ENST00000602663 2351 ntBASIC7.91□□□□□ -1.14
RNF39Q9H2S5 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
RNF39Q9H2S5 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
RNF39Q9H2S5 SNORD115-35-201ENST00000365122 82 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 SNORA48.5-201ENST00000391143 135 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 RNU6-938P-201ENST00000411285 103 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 RPL32P35-201ENST00000415214 394 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 AC087588.1-201ENST00000462203 316 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 AC092824.1-201ENST00000483524 576 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 RN7SL775P-201ENST00000498361 336 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 RN7SL14P-201ENST00000579715 298 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 AC099654.15-201ENST00000639802 509 ntBASIC7.9□□□□□ -1.14
RNF39Q9H2S5 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 AC010889.1-201ENST00000566193 2666 ntBASIC7.9□□□□□ -1.15
RNF39Q9H2S5 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 MAPK10-279ENST00000641157 2449 ntBASIC7.9□□□□□ -1.15
RNF39Q9H2S5 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.9□□□□□ -1.15
RNF39Q9H2S5 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 RNU6-727P-201ENST00000363592 107 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 SNORA70.5-201ENST00000365519 135 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 RNA5SP56-201ENST00000410277 118 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 Y_RNA.620-201ENST00000411009 88 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.89□□□□□ -1.15
RNF39Q9H2S5 DDX39BP1-205ENST00000422507 192 ntBASIC7.89□□□□□ -1.15
RNF39Q9H2S5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms