Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS11Q9H270 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS11Q9H270 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS11Q9H270 AP003122.4-201ENST00000530980 758 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS11Q9H270 GSTP1P1-201ENST00000548078 319 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 HMGB3P26-201ENST00000560051 582 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 ATP5J2P6-201ENST00000565203 266 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS11Q9H270 VN1R80P-201ENST00000597126 338 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 RPL12P25-202ENST00000598100 674 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 AC126915.2-201ENST00000610957 190 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 RMST_3.1-201ENST00000611651 109 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 AL139089.1-201ENST00000620372 975 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 AC024940.5-201ENST00000622889 474 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 AL049767.1-202ENST00000637826 242 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS11Q9H270 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS11Q9H270 LINC00561-201ENST00000565815 2738 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.86□□□□□ -1.63
VPS11Q9H270 EOGT-210ENST00000615922 1931 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS11Q9H270 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS11Q9H270 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS11Q9H270 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS11Q9H270 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS11Q9H270 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS11Q9H270 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VPS11Q9H270 RN7SKP104-201ENST00000362605 328 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS11Q9H270 RNU6-574P-201ENST00000384265 107 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 SNORA70E-201ENST00000384492 135 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 RNU6-1160P-201ENST00000384546 104 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 RNA5SP372-201ENST00000390836 115 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 Y_RNA.598-201ENST00000410480 95 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 RPS3AP3-201ENST00000411933 242 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 CYCSP10-201ENST00000417973 294 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 DDX39BP1-205ENST00000422507 192 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 AL035410.1-201ENST00000427409 427 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.85□□□□□ -1.63
VPS11Q9H270 PSMA2P3-201ENST00000429685 675 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS11Q9H270 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS11Q9H270 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS11Q9H270 ARPC3P5-201ENST00000448802 534 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 GAPDHP17-201ENST00000449858 1001 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 RPL26P28-201ENST00000451325 435 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS11Q9H270 RPL5P30-201ENST00000465511 891 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS11Q9H270 UBA52P7-201ENST00000486088 380 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 RN7SL244P-201ENST00000493405 297 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 AC114981.1-201ENST00000503897 678 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS11Q9H270 COX6B1P5-201ENST00000509843 249 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 AF131216.2-201ENST00000512316 564 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS11Q9H270 RNU6-1046P-201ENST00000516538 107 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 RNA5SP43-201ENST00000516559 110 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 HIF1AP1-201ENST00000553642 175 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.85□□□□□ -1.63
VPS11Q9H270 TVP23CP2-201ENST00000571473 623 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 SNORA74C-1-201ENST00000580726 201 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 RN7SL753P-201ENST00000581238 290 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS11Q9H270 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS11Q9H270 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS11Q9H270 AC005858.4-201ENST00000623191 700 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 AC092435.4-201ENST00000623012 4159 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS11Q9H270 AC008758.3-201ENST00000507003 1829 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS11Q9H270 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VPS11Q9H270 AL031985.3-201ENST00000565390 2449 ntBASIC4.85□□□□□ -1.63
VPS11Q9H270 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
VPS11Q9H270 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS11Q9H270 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
VPS11Q9H270 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VPS11Q9H270 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS11Q9H270 AC009951.1-201ENST00000623674 2614 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS11Q9H270 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 GDI2P1-201ENST00000429312 1336 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 DCAF13P1-201ENST00000495256 1330 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 OR5BR1P-201ENST00000524992 1330 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 Y_RNA.1-201ENST00000352915 104 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS11Q9H270 Y_RNA.146-201ENST00000363549 102 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 RNU6-1085P-201ENST00000363576 107 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 Y_RNA.166-201ENST00000363730 102 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 RN7SKP160-201ENST00000363804 340 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 RNU1-130P-201ENST00000363930 160 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 RNA5SP455-201ENST00000365190 119 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VPS11Q9H270 RNU6-1103P-201ENST00000384150 107 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 RNU6-463P-201ENST00000384340 107 ntBASIC4.84□□□□□ -1.63
VPS11Q9H270 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VPS11Q9H270 RPL23AP29-201ENST00000397284 453 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms