Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC3.44□□□□□ -1.86
KRTAP3-1Q9BYR8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC073365.1-203ENST00000641055 1992 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC005224.3-201ENST00000584683 2140 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC100821.1-201ENST00000523153 2479 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 SNORD115-32-201ENST00000364079 82 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 Y_RNA.357-201ENST00000365487 109 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 RNU6-968P-201ENST00000384076 107 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 Y_RNA.570-201ENST00000384750 101 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 Y_RNA.571-201ENST00000384753 98 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 RNU1-139P-201ENST00000391307 165 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 RPSAP1-201ENST00000421328 880 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC124916.1-201ENST00000444020 547 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 MRPS10P1-201ENST00000448483 130 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 TPT1P12-201ENST00000448968 492 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 GAPDHP53-201ENST00000458397 924 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 SNX18P26-201ENST00000458433 740 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 RN7SL213P-201ENST00000463482 317 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC008620.1-201ENST00000468453 592 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC114982.1-201ENST00000469402 321 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC022790.1-201ENST00000522872 204 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AP001803.1-201ENST00000525668 147 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC007537.1-201ENST00000539347 327 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 MIR3684-201ENST00000579779 74 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AL161798.1-201ENST00000604630 131 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC097467.4-201ENST00000605504 141 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AC138904.2-201ENST00000614412 107 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AL360181.4-201ENST00000621752 134 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 MIR6834-201ENST00000622807 81 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AL117339.4-201ENST00000608335 7063 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 AL662795.2-201ENST00000624252 3706 ntBASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 FTO-215ENST00000636491 1676 ntTSL 5 BASIC3.43□□□□□ -1.86
KRTAP3-1Q9BYR8 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 CREM-217ENST00000439705 2306 ntTSL 5 BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 Y_RNA.23-201ENST00000362496 106 ntBASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 Y_RNA.230-201ENST00000364348 109 ntBASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 RNU6-312P-201ENST00000364629 107 ntBASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 RNU5E-7P-201ENST00000365290 117 ntBASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 SNORA70.5-201ENST00000365519 135 ntBASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 Y_RNA.446-201ENST00000384178 104 ntBASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 RNU6-837P-201ENST00000391056 108 ntBASIC3.42□□□□□ -1.86
KRTAP3-1Q9BYR8 RNU6-257P-201ENST00000410238 98 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms