Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RPL5P7-201ENST00000444235 813 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.1□□□□□ -1.43
CALR3Q96L12 AC104058.1-201ENST00000448028 297 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.1□□□□□ -1.43
CALR3Q96L12 RPS27P27-201ENST00000498779 255 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 RNU6-513P-201ENST00000516104 104 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.1□□□□□ -1.43
CALR3Q96L12 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.1□□□□□ -1.43
CALR3Q96L12 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.1□□□□□ -1.43
CALR3Q96L12 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.1□□□□□ -1.43
CALR3Q96L12 MIR4458-201ENST00000578872 75 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.1□□□□□ -1.43
CALR3Q96L12 AL670379.10-201ENST00000604330 253 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AL158032.1-201ENST00000605401 106 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AL670379.9-201ENST00000605428 253 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AC022893.3-201ENST00000607665 437 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AL139124.1-201ENST00000609123 421 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AL021918.2-201ENST00000613415 194 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 AC008013.2-202ENST00000637965 364 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
CALR3Q96L12 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CALR3Q96L12 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CALR3Q96L12 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CALR3Q96L12 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CALR3Q96L12 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CALR3Q96L12 AP004607.3-201ENST00000530354 3915 ntBASIC6.1□□□□□ -1.43
CALR3Q96L12 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CALR3Q96L12 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CALR3Q96L12 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
CALR3Q96L12 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CALR3Q96L12 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CALR3Q96L12 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.09□□□□□ -1.43
CALR3Q96L12 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CALR3Q96L12 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CALR3Q96L12 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CALR3Q96L12 Y_RNA.399-201ENST00000383955 105 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CALR3Q96L12 RNU4-34P-201ENST00000410431 124 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.09□□□□□ -1.43
CALR3Q96L12 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.09□□□□□ -1.43
CALR3Q96L12 LINC00328-2P-201ENST00000436585 219 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AL353662.1-201ENST00000439099 327 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 NEFMP1-201ENST00000443423 1006 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 RPL7L1P1-201ENST00000448259 785 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AC009963.2-201ENST00000453431 138 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 FGF7P3-201ENST00000454645 303 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.09□□□□□ -1.43
CALR3Q96L12 DYNLL1P5-201ENST00000467158 270 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AL163540.1-201ENST00000485382 386 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.09□□□□□ -1.43
CALR3Q96L12 RNU6-352P-201ENST00000516908 107 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 OR4H12P-201ENST00000556269 907 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 RPA2P1-201ENST00000556557 721 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 HMGN1P26-201ENST00000558737 303 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AC138761.3-201ENST00000579993 334 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 MIR7853-201ENST00000584820 132 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CALR3Q96L12 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.09□□□□□ -1.43
CALR3Q96L12 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.09□□□□□ -1.43
CALR3Q96L12 AC245014.3-201ENST00000618589 347 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AL138693.1-201ENST00000622219 129 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 AC073592.6-201ENST00000624271 415 ntBASIC6.09□□□□□ -1.43
CALR3Q96L12 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CALR3Q96L12 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
CALR3Q96L12 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
CALR3Q96L12 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.08□□□□□ -1.44
CALR3Q96L12 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 SNORD116-11-201ENST00000383882 92 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 Y_RNA.395-201ENST00000383945 109 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.08□□□□□ -1.44
CALR3Q96L12 RNU6-1304P-201ENST00000411374 106 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 VDAC1P9-201ENST00000412766 841 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AL139095.3-201ENST00000419672 1203 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 RPL34P3-201ENST00000421454 338 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 TMEM183AP1-205ENST00000432739 290 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.08□□□□□ -1.44
CALR3Q96L12 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.08□□□□□ -1.44
CALR3Q96L12 RN7SL570P-201ENST00000484405 292 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AC113367.2-201ENST00000505749 160 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AC093303.1-201ENST00000514549 295 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 SCARNA18.1-201ENST00000516330 83 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.08□□□□□ -1.44
CALR3Q96L12 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.08□□□□□ -1.44
CALR3Q96L12 AP003396.4-201ENST00000527574 265 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.08□□□□□ -1.44
CALR3Q96L12 AC018630.1-201ENST00000541376 925 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.08□□□□□ -1.44
CALR3Q96L12 AC090115.3-201ENST00000553218 849 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.08□□□□□ -1.44
CALR3Q96L12 MIR5690-201ENST00000583739 73 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.08□□□□□ -1.44
CALR3Q96L12 AC104763.2-201ENST00000604179 382 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AL162431.4-201ENST00000604674 411 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.08□□□□□ -1.44
CALR3Q96L12 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 AL359547.2-201ENST00000615810 418 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 AC099669.2-201ENST00000616549 437 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms