Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 HMGB3P11-201ENST00000440127 604 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 PLGLA-201ENST00000465668 449 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 RNA5SP217-201ENST00000515959 91 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC125611.1-201ENST00000549563 229 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC008127.2-201ENST00000549925 1075 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC087499.8-201ENST00000578406 226 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 KPNA2P3-201ENST00000584190 848 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC231759.1-201ENST00000616455 597 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AL354798.1-201ENST00000622505 329 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC084035.1-201ENST00000634543 607 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 MTND2P41-201ENST00000637599 773 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AC109315.1-201ENST00000584143 1347 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AL353743.1-202ENST00000431724 1695 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 NUP58P1-201ENST00000502546 1738 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 FRG1CP-201ENST00000358464 769 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNU5D-1-201ENST00000363299 116 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 SNORA7.2-201ENST00000364446 145 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNA5SP189-201ENST00000364920 115 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 SNORD116-12-201ENST00000384468 92 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNA5SP317-201ENST00000410176 116 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNU2-42P-201ENST00000410697 113 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNA5SP311-201ENST00000411290 116 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AL445669.2-201ENST00000454425 421 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC093267.1-201ENST00000489176 961 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC010460.1-201ENST00000507087 466 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNU6-1225P-201ENST00000516336 65 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNA5SP315-201ENST00000516340 116 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNA5SP312-201ENST00000517068 116 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AL355812.1-201ENST00000603215 216 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC103881.1-201ENST00000603476 538 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AL035411.2-201ENST00000604022 421 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC008745.1-201ENST00000604064 271 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 DPRXP5-201ENST00000604662 539 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC144521.1-201ENST00000607148 956 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC005962.2-201ENST00000611427 652 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC005332.6-201ENST00000613178 446 ntBASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRUB1Q8WWH5 AC118273.1-201ENST00000525324 3006 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 MTCO1P23-201ENST00000415223 1526 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 AL121657.1-201ENST00000327215 531 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 Y_RNA.25-201ENST00000362528 102 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 RNA5SP258-201ENST00000362750 119 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 RNU6-216P-201ENST00000363282 104 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 RNU1-32P-201ENST00000363937 159 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 MIR607-201ENST00000385241 96 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 RNU6-821P-201ENST00000390995 107 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 RPL31P1-201ENST00000398116 372 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 RNU4-22P-201ENST00000411058 166 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 RPL32P35-201ENST00000415214 394 ntBASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRUB1Q8WWH5 AL117339.2-201ENST00000430475 180 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms