Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC107934.1-201ENST00000522215 217 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AP000857.1-201ENST00000532151 543 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 MIR6128-201ENST00000615528 109 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 AC118658.2-201ENST00000618697 459 ntBASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NEDD1Q8NHV4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 THAP12P4-201ENST00000528321 2266 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 Y_RNA.14-201ENST00000362415 103 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 SNORA20.1-201ENST00000364790 130 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 RN7SKP186-201ENST00000365371 303 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 SNORA75B-201ENST00000384053 137 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 RNU6-662P-201ENST00000384253 104 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 RNU6-601P-201ENST00000384540 107 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 MED28P3-201ENST00000444288 531 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 RNU7-136P-201ENST00000458819 69 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 TRBV8-2-201ENST00000475637 270 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 RN7SL826P-201ENST00000479724 288 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 FO393415.2-201ENST00000480085 343 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 AC012123.2-201ENST00000485809 248 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 RPS27P23-201ENST00000487608 251 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 AP005435.4-201ENST00000529514 284 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 MIR4424-201ENST00000585257 86 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 AC133644.2-201ENST00000608142 540 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 AC092608.2-201ENST00000624427 218 ntBASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD1Q8NHV4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC091812.1-201ENST00000432235 1948 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RNU6-1252P-201ENST00000363054 104 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 Y_RNA.461-201ENST00000384263 103 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 Y_RNA.562-201ENST00000384695 113 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC093162.1-201ENST00000419682 124 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 PSMA6P3-201ENST00000428242 164 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RPS3AP54-201ENST00000435535 734 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 KNOP1P3-201ENST00000446933 426 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RPL37P3-201ENST00000456825 293 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 PSMC1P13-201ENST00000458195 985 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC108161.1-201ENST00000461060 402 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC104849.1-201ENST00000462623 405 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RN7SL610P-201ENST00000463845 291 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RN7SL189P-201ENST00000468631 289 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RN7SL97P-201ENST00000486780 299 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 RN7SKP219-201ENST00000516825 296 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 AL355297.3-201ENST00000604082 446 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 MIR6839-201ENST00000620425 113 ntBASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD1Q8NHV4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms