Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ISCUP1-201ENST00000454451 448 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 ARPC3P2-201ENST00000457786 533 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.11□□□□□ -1.75
NR1H2P55055 snoU13.4-201ENST00000458916 104 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC006517.1-201ENST00000480485 328 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC106872.3-201ENST00000495104 446 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC092045.1-201ENST00000495716 1231 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC104164.2-201ENST00000496953 495 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.11□□□□□ -1.75
NR1H2P55055 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NR1H2P55055 AC112198.1-201ENST00000505369 1220 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.11□□□□□ -1.75
NR1H2P55055 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.11□□□□□ -1.75
NR1H2P55055 OR5BM1P-201ENST00000512021 366 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 MTCO3P28-201ENST00000513351 515 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.11□□□□□ -1.75
NR1H2P55055 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.11□□□□□ -1.75
NR1H2P55055 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.11□□□□□ -1.75
NR1H2P55055 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.11□□□□□ -1.75
NR1H2P55055 AC069061.3-201ENST00000582254 823 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC006254.3-201ENST00000603353 884 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC011451.2-201ENST00000604303 598 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC068831.8-201ENST00000620171 435 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 AC019278.1-201ENST00000623516 479 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.11□□□□□ -1.75
NR1H2P55055 PCMTD1P7-201ENST00000634506 357 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.11□□□□□ -1.75
NR1H2P55055 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.11□□□□□ -1.75
NR1H2P55055 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NR1H2P55055 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
NR1H2P55055 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NR1H2P55055 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
NR1H2P55055 AC095050.2-201ENST00000510748 1458 ntBASIC4.11□□□□□ -1.75
NR1H2P55055 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.1□□□□□ -1.75
NR1H2P55055 ELL2P3-201ENST00000457883 1602 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NR1H2P55055 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 AC092447.10-201ENST00000620607 1652 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NR1H2P55055 AL133383.2-201ENST00000622958 2336 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NR1H2P55055 OR56B2P-202ENST00000641377 2453 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 RNU6-600P-201ENST00000362524 99 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 Y_RNA.126-201ENST00000363382 111 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.1□□□□□ -1.75
NR1H2P55055 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NR1H2P55055 MIR1193-201ENST00000408109 78 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 RNU2-37P-201ENST00000410695 177 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 RNU6-920P-201ENST00000410926 92 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 RPL23AP39-201ENST00000415533 405 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 AC127526.1-201ENST00000417526 366 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 AC140479.3-201ENST00000418944 1126 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.1□□□□□ -1.75
NR1H2P55055 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 AC118469.1-201ENST00000442943 488 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 MTND1P9-201ENST00000453775 944 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.1□□□□□ -1.75
NR1H2P55055 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.1□□□□□ -1.75
NR1H2P55055 MLLT10P2-201ENST00000506434 249 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 AC091868.1-201ENST00000508746 304 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 AC008802.1-201ENST00000519121 791 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 OR5AP1P-201ENST00000529730 940 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.1□□□□□ -1.75
NR1H2P55055 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.1□□□□□ -1.75
NR1H2P55055 RN7SL652P-201ENST00000577769 300 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.1□□□□□ -1.75
NR1H2P55055 RPL12P25-202ENST00000598100 674 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 AC012669.1-201ENST00000603209 283 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 AC048347.1-201ENST00000624621 427 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NR1H2P55055 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.1□□□□□ -1.75
NR1H2P55055 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NR1H2P55055 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.1□□□□□ -1.75
NR1H2P55055 AC008725.1-201ENST00000605123 2263 ntBASIC4.1□□□□□ -1.75
NR1H2P55055 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NR1H2P55055 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NR1H2P55055 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 AC125257.1-201ENST00000560400 2930 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NR1H2P55055 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NR1H2P55055 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.09□□□□□ -1.75
NR1H2P55055 RNA5SP447-201ENST00000363749 119 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 RNU6-1074P-201ENST00000383995 104 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 SNORA3C-201ENST00000408792 125 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.09□□□□□ -1.75
NR1H2P55055 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.09□□□□□ -1.75
NR1H2P55055 CCDC58P2-201ENST00000417131 366 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 CYP4F29P-201ENST00000420685 446 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 UQCRBP1-201ENST00000421129 336 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 RPL23AP1-201ENST00000428990 471 ntBASIC4.09□□□□□ -1.75
NR1H2P55055 CBX1P1-201ENST00000440184 427 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms