Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC012443.1-201ENST00000605605 231 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 AC024060.1-201ENST00000607052 494 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 BX323046.1-201ENST00000610145 535 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 AC009237.15-201ENST00000610252 501 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 AC005344.1-201ENST00000613391 459 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 AL354798.1-201ENST00000622505 329 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CTNNA1P35221 OR1S1-201ENST00000624470 978 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 RNA5SP196-201ENST00000625967 102 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 AL021368.2-201ENST00000606125 5352 ntBASIC3.8□□□□□ -1.8
CTNNA1P35221 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNNA1P35221 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTNNA1P35221 CDR1-202ENST00000625883 1485 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA1P35221 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 snoZ40.1-201ENST00000364540 72 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC068538.1-201ENST00000376856 336 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AL049693.1-201ENST00000402760 611 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 U3.39-201ENST00000408569 239 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 RNU6-55P-201ENST00000411092 107 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 RNU6-954P-201ENST00000411355 107 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AL161449.1-201ENST00000414531 1199 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA1P35221 OR4K6P-201ENST00000416478 897 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 RPL17P36-201ENST00000420302 549 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA1P35221 C4BPAP2-201ENST00000428434 478 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNNA1P35221 GTF2IP3-201ENST00000433887 494 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC010655.1-201ENST00000449336 292 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC104308.1-201ENST00000454621 333 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AL133162.1-201ENST00000463228 453 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 RPS4XP10-201ENST00000465034 731 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC108734.3-201ENST00000481241 1165 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 CBX3P3-201ENST00000508108 532 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA1P35221 RNU6-1225P-201ENST00000516336 65 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 RNU6-711P-201ENST00000517255 106 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AP000926.4-201ENST00000527351 454 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC011602.1-201ENST00000546484 331 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 CR383656.7-201ENST00000548164 174 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AP005205.1-201ENST00000563503 508 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC053481.3-201ENST00000577881 843 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC096947.1-201ENST00000603233 470 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AL590392.1-201ENST00000604960 446 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC018645.2-201ENST00000609151 472 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AL136295.6-201ENST00000610486 658 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC084824.4-201ENST00000620106 731 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC073348.1-201ENST00000623002 331 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC004009.2-201ENST00000623016 728 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 AC104985.3-201ENST00000623479 597 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CTNNA1P35221 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 AP004289.2-201ENST00000444413 1457 ntBASIC3.79□□□□□ -1.8
CTNNA1P35221 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNNA1P35221 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA1P35221 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA1P35221 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA1P35221 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA1P35221 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA1P35221 AC068647.1-201ENST00000489539 2265 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA1P35221 RNU4-51P-201ENST00000364206 140 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 MIR30B-201ENST00000384850 88 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 RPL7P60-201ENST00000397636 735 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 PPIAP31-201ENST00000405422 495 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 U3.42-201ENST00000408746 214 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 Z75741.2-201ENST00000417272 1167 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 COX6CP17-201ENST00000421389 185 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 RPL31P12-201ENST00000422587 358 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 GTF2IP23-201ENST00000423746 351 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA1P35221 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.78□□□□□ -1.8
CTNNA1P35221 TXNP1-201ENST00000441872 371 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNNA1P35221 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA1P35221 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNNA1P35221 VN1R105P-201ENST00000486595 910 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNNA1P35221 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA1P35221 MTCO1P35-201ENST00000515270 228 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA1P35221 OR5AK1P-201ENST00000524837 922 ntBASIC3.78□□□□□ -1.8
CTNNA1P35221 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms