Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ATF1P18846 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
ATF1P18846 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ATF1P18846 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.62□□□□□ -1.99
ATF1P18846 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ATF1P18846 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ATF1P18846 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ATF1P18846 RNU6-1249P-201ENST00000363237 111 ntBASIC2.62□□□□□ -1.99
ATF1P18846 RNU6-444P-201ENST00000383988 108 ntBASIC2.62□□□□□ -1.99
ATF1P18846 RNU6-761P-201ENST00000384148 107 ntBASIC2.62□□□□□ -1.99
ATF1P18846 RNU6-441P-201ENST00000384545 106 ntBASIC2.62□□□□□ -1.99
ATF1P18846 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ATF1P18846 SNORD67-201ENST00000390833 111 ntBASIC2.62□□□□□ -1.99
ATF1P18846 SNORD88.1-201ENST00000408684 91 ntBASIC2.62□□□□□ -1.99
ATF1P18846 RNU4-47P-201ENST00000410876 114 ntBASIC2.62□□□□□ -1.99
ATF1P18846 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.62□□□□□ -1.99
ATF1P18846 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 AC006548.1-201ENST00000427470 102 ntBASIC2.62□□□□□ -1.99
ATF1P18846 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 AC079780.1-201ENST00000428259 207 ntBASIC2.62□□□□□ -1.99
ATF1P18846 MTND4LP14-201ENST00000429447 288 ntBASIC2.62□□□□□ -1.99
ATF1P18846 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 SETP8-201ENST00000435341 628 ntBASIC2.62□□□□□ -1.99
ATF1P18846 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.62□□□□□ -1.99
ATF1P18846 Z75741.1-201ENST00000446793 314 ntBASIC2.62□□□□□ -1.99
ATF1P18846 RPL36AP33-201ENST00000450395 310 ntBASIC2.62□□□□□ -1.99
ATF1P18846 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 AC093392.2-201ENST00000450682 337 ntBASIC2.62□□□□□ -1.99
ATF1P18846 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.62□□□□□ -1.99
ATF1P18846 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.62□□□□□ -1.99
ATF1P18846 RPS23P3-201ENST00000470993 430 ntBASIC2.62□□□□□ -1.99
ATF1P18846 AC020898.1-201ENST00000474167 787 ntBASIC2.62□□□□□ -1.99
ATF1P18846 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ATF1P18846 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 RN7SKP282-201ENST00000516824 299 ntBASIC2.62□□□□□ -1.99
ATF1P18846 SNORA31.26-201ENST00000517250 137 ntBASIC2.62□□□□□ -1.99
ATF1P18846 OR4A45P-201ENST00000529954 901 ntBASIC2.62□□□□□ -1.99
ATF1P18846 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.62□□□□□ -1.99
ATF1P18846 AL121603.1-201ENST00000553815 142 ntBASIC2.62□□□□□ -1.99
ATF1P18846 CKS1BP1-201ENST00000555221 240 ntBASIC2.62□□□□□ -1.99
ATF1P18846 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 AL157394.1-201ENST00000562983 1224 ntBASIC2.62□□□□□ -1.99
ATF1P18846 COX6CP3-201ENST00000580869 223 ntBASIC2.62□□□□□ -1.99
ATF1P18846 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.62□□□□□ -1.99
ATF1P18846 AC008962.1-201ENST00000605729 304 ntBASIC2.62□□□□□ -1.99
ATF1P18846 AL020991.1-201ENST00000612314 373 ntBASIC2.62□□□□□ -1.99
ATF1P18846 AC007318.2-201ENST00000620999 243 ntBASIC2.62□□□□□ -1.99
ATF1P18846 AC034229.5-201ENST00000624258 185 ntBASIC2.62□□□□□ -1.99
ATF1P18846 CR381572.1-201ENST00000625098 102 ntBASIC2.62□□□□□ -1.99
ATF1P18846 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.62□□□□□ -1.99
ATF1P18846 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ATF1P18846 FRG1DP-201ENST00000635586 771 ntBASIC2.62□□□□□ -1.99
ATF1P18846 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ATF1P18846 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ATF1P18846 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
ATF1P18846 ZNF807-201ENST00000328088 1707 ntBASIC2.62□□□□□ -1.99
ATF1P18846 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.61□□□□□ -1.99
ATF1P18846 AP002907.1-201ENST00000606361 1430 ntBASIC2.61□□□□□ -1.99
ATF1P18846 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.61□□□□□ -1.99
ATF1P18846 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATF1P18846 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
ATF1P18846 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATF1P18846 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.61□□□□□ -1.99
ATF1P18846 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.61□□□□□ -1.99
ATF1P18846 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
ATF1P18846 SNORA26.7-201ENST00000391288 122 ntBASIC2.61□□□□□ -1.99
ATF1P18846 FABP12P1-201ENST00000401911 322 ntBASIC2.61□□□□□ -1.99
ATF1P18846 RNU4-65P-201ENST00000410473 140 ntBASIC2.61□□□□□ -1.99
ATF1P18846 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATF1P18846 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
ATF1P18846 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.61□□□□□ -1.99
ATF1P18846 AC233728.2-201ENST00000425348 757 ntBASIC2.61□□□□□ -1.99
ATF1P18846 NIPA2P1-201ENST00000426223 976 ntBASIC2.61□□□□□ -1.99
ATF1P18846 RPP40P1-201ENST00000426762 456 ntBASIC2.61□□□□□ -1.99
ATF1P18846 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.61□□□□□ -1.99
ATF1P18846 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.61□□□□□ -1.99
ATF1P18846 AC006028.1-201ENST00000438379 402 ntBASIC2.61□□□□□ -1.99
ATF1P18846 RPL21P2-201ENST00000440049 481 ntBASIC2.61□□□□□ -1.99
ATF1P18846 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.61□□□□□ -1.99
ATF1P18846 RN7SL499P-201ENST00000481141 276 ntBASIC2.61□□□□□ -1.99
ATF1P18846 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.61□□□□□ -1.99
ATF1P18846 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.61□□□□□ -1.99
ATF1P18846 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.61□□□□□ -1.99
ATF1P18846 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.61□□□□□ -1.99
ATF1P18846 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.61□□□□□ -1.99
ATF1P18846 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.61□□□□□ -1.99
ATF1P18846 UBL5P2-201ENST00000583788 219 ntBASIC2.61□□□□□ -1.99
ATF1P18846 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.61□□□□□ -1.99
ATF1P18846 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.61□□□□□ -1.99
ATF1P18846 AL031985.2-201ENST00000600955 480 ntBASIC2.61□□□□□ -1.99
ATF1P18846 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.61□□□□□ -1.99
ATF1P18846 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.61□□□□□ -1.99
ATF1P18846 AC105227.2-201ENST00000615075 605 ntBASIC2.61□□□□□ -1.99
ATF1P18846 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.61□□□□□ -1.99
ATF1P18846 AC024341.1-201ENST00000526444 1552 ntBASIC2.61□□□□□ -1.99
ATF1P18846 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms