Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 UBDP1-202ENST00000457888 382 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 AL136126.1-201ENST00000473603 402 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 AC010301.1-201ENST00000473936 355 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.38□□□□□ -1.87
MT-ND1P03886 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.38□□□□□ -1.87
MT-ND1P03886 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.38□□□□□ -1.87
MT-ND1P03886 RN7SL323P-201ENST00000494712 295 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 MTCYBP16-201ENST00000509187 1129 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
MT-ND1P03886 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.38□□□□□ -1.87
MT-ND1P03886 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.38□□□□□ -1.87
MT-ND1P03886 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 DUXAP6-201ENST00000553858 601 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 AC022662.1-201ENST00000580252 331 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
MT-ND1P03886 MTND2P41-201ENST00000637599 773 ntBASIC3.38□□□□□ -1.87
MT-ND1P03886 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
MT-ND1P03886 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MT-ND1P03886 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MT-ND1P03886 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.37□□□□□ -1.87
MT-ND1P03886 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MT-ND1P03886 RNU6-989P-201ENST00000362756 107 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 RNU6-1249P-201ENST00000363237 111 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 RNU6-560P-201ENST00000364007 108 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
MT-ND1P03886 RNU6-328P-201ENST00000390887 106 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.37□□□□□ -1.87
MT-ND1P03886 RNA5SP80-201ENST00000410475 111 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 RNU2-42P-201ENST00000410697 113 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 RPS7P15-201ENST00000415804 584 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AIMP1P1-201ENST00000418670 937 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 HMGB1P49-201ENST00000418882 569 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 DPRXP1-201ENST00000426312 460 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC005345.1-201ENST00000431868 217 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.37□□□□□ -1.87
MT-ND1P03886 KCTD10P1-201ENST00000434203 625 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.37□□□□□ -1.87
MT-ND1P03886 OR4C10P-201ENST00000434991 931 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AC098826.2-201ENST00000452011 651 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC007537.2-201ENST00000472093 511 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AC010460.1-201ENST00000507087 466 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 FABP5P12-201ENST00000515543 389 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.37□□□□□ -1.87
MT-ND1P03886 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.37□□□□□ -1.87
MT-ND1P03886 DUXAP5-201ENST00000529668 529 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AL121603.1-201ENST00000553815 142 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.37□□□□□ -1.87
MT-ND1P03886 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AL590392.1-201ENST00000604960 446 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC128687.1-201ENST00000605304 619 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC009464.1-201ENST00000615731 469 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC022149.2-201ENST00000621061 203 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC022509.4-201ENST00000621404 572 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC073348.1-201ENST00000623002 331 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 FP236240.3-201ENST00000623061 327 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC097655.1-201ENST00000635075 318 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
MT-ND1P03886 AC068647.1-201ENST00000489539 2265 ntBASIC3.37□□□□□ -1.87
MT-ND1P03886 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MT-ND1P03886 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MT-ND1P03886 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MT-ND1P03886 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MT-ND1P03886 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
MT-ND1P03886 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
MT-ND1P03886 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.36□□□□□ -1.87
MT-ND1P03886 Z99496.1-201ENST00000469424 1477 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
MT-ND1P03886 RNA5SP295-201ENST00000362655 121 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 RNU6-251P-201ENST00000363235 104 ntBASIC3.36□□□□□ -1.87
MT-ND1P03886 SNORD113-6-201ENST00000363345 75 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms