Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
PCF11O94913 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.9□□□□□ -1.78
PCF11O94913 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.9□□□□□ -1.78
PCF11O94913 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCF11O94913 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.9□□□□□ -1.79
PCF11O94913 AC104454.1-201ENST00000421341 1401 ntBASIC3.9□□□□□ -1.79
PCF11O94913 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCF11O94913 MAPK10-322ENST00000641485 4530 ntBASIC3.9□□□□□ -1.79
PCF11O94913 AL592437.2-201ENST00000421655 2434 ntBASIC3.89□□□□□ -1.79
PCF11O94913 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.89□□□□□ -1.79
PCF11O94913 XPOTP1-201ENST00000443317 2398 ntBASIC3.89□□□□□ -1.79
PCF11O94913 Y_RNA.540-201ENST00000384638 111 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.89□□□□□ -1.79
PCF11O94913 SCARNA17.1-201ENST00000516211 143 ntBASIC3.89□□□□□ -1.79
PCF11O94913 SCARNA17.2-201ENST00000516334 143 ntBASIC3.89□□□□□ -1.79
PCF11O94913 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.89□□□□□ -1.79
PCF11O94913 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.89□□□□□ -1.79
PCF11O94913 PDCL2P2-201ENST00000533651 189 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AC123904.3-201ENST00000547218 814 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.89□□□□□ -1.79
PCF11O94913 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.89□□□□□ -1.79
PCF11O94913 AC017076.1-201ENST00000607613 578 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AC104237.2-201ENST00000612456 443 ntBASIC3.89□□□□□ -1.79
PCF11O94913 SCARNA17.4-201ENST00000614296 143 ntBASIC3.89□□□□□ -1.79
PCF11O94913 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PCF11O94913 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.89□□□□□ -1.79
PCF11O94913 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCF11O94913 AC090229.1-201ENST00000590983 1609 ntBASIC3.89□□□□□ -1.79
PCF11O94913 RNA5SP105-201ENST00000391123 113 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AL121882.1-201ENST00000422893 417 ntBASIC3.89□□□□□ -1.79
PCF11O94913 RWDD4P2-201ENST00000426392 563 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.89□□□□□ -1.79
PCF11O94913 AC011816.1-201ENST00000441346 546 ntBASIC3.89□□□□□ -1.79
PCF11O94913 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.89□□□□□ -1.79
PCF11O94913 IFNWP4-201ENST00000453148 294 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AC068587.2-201ENST00000478386 781 ntBASIC3.89□□□□□ -1.79
PCF11O94913 RWDD4P1-201ENST00000488019 565 ntBASIC3.89□□□□□ -1.79
PCF11O94913 NIPA2P2-201ENST00000496376 1083 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.89□□□□□ -1.79
PCF11O94913 AL109741.3-201ENST00000561748 592 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AC068313.1-201ENST00000604028 1008 ntBASIC3.89□□□□□ -1.79
PCF11O94913 AL713998.2-201ENST00000604538 1198 ntBASIC3.89□□□□□ -1.79
PCF11O94913 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCF11O94913 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCF11O94913 AC010329.2-201ENST00000595195 2737 ntBASIC3.88□□□□□ -1.79
PCF11O94913 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCF11O94913 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.88□□□□□ -1.79
PCF11O94913 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCF11O94913 RNU2-6P-201ENST00000411404 190 ntBASIC3.88□□□□□ -1.79
PCF11O94913 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.88□□□□□ -1.79
PCF11O94913 AC126182.1-201ENST00000478134 357 ntBASIC3.88□□□□□ -1.79
PCF11O94913 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.88□□□□□ -1.79
PCF11O94913 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PCF11O94913 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.88□□□□□ -1.79
PCF11O94913 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.88□□□□□ -1.79
PCF11O94913 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.88□□□□□ -1.79
PCF11O94913 OR10AB1P-202ENST00000641219 1686 ntBASIC3.87□□□□□ -1.79
PCF11O94913 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PCF11O94913 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.87□□□□□ -1.79
PCF11O94913 RPS20P25-201ENST00000412447 352 ntBASIC3.87□□□□□ -1.79
PCF11O94913 BTG3P1-201ENST00000435859 716 ntBASIC3.87□□□□□ -1.79
PCF11O94913 TRBV1-201ENST00000476502 284 ntBASIC3.87□□□□□ -1.79
PCF11O94913 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.87□□□□□ -1.79
PCF11O94913 MTND4P2-201ENST00000507767 1203 ntBASIC3.87□□□□□ -1.79
PCF11O94913 SNORA31.1-201ENST00000515993 133 ntBASIC3.87□□□□□ -1.79
PCF11O94913 SNORA31.5-201ENST00000516190 133 ntBASIC3.87□□□□□ -1.79
PCF11O94913 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.87□□□□□ -1.79
PCF11O94913 OR7K1P-201ENST00000546439 926 ntBASIC3.87□□□□□ -1.79
PCF11O94913 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.87□□□□□ -1.79
PCF11O94913 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCF11O94913 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.87□□□□□ -1.79
PCF11O94913 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.87□□□□□ -1.79
PCF11O94913 AC069528.2-201ENST00000624849 1991 ntBASIC3.87□□□□□ -1.79
PCF11O94913 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCF11O94913 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCF11O94913 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCF11O94913 AC011155.1-201ENST00000316512 456 ntBASIC3.86□□□□□ -1.79
PCF11O94913 AL354710.1-201ENST00000453641 246 ntBASIC3.86□□□□□ -1.79
PCF11O94913 VN1R17P-201ENST00000472048 1090 ntBASIC3.86□□□□□ -1.79
PCF11O94913 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PCF11O94913 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.86□□□□□ -1.79
PCF11O94913 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.86□□□□□ -1.79
PCF11O94913 ISCA1P3-201ENST00000577104 373 ntBASIC3.86□□□□□ -1.79
PCF11O94913 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.86□□□□□ -1.79
PCF11O94913 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.86□□□□□ -1.79
PCF11O94913 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCF11O94913 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCF11O94913 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCF11O94913 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCF11O94913 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCF11O94913 RNU1-73P-201ENST00000383971 164 ntBASIC3.85□□□□□ -1.79
PCF11O94913 MIR518E-201ENST00000385252 88 ntBASIC3.85□□□□□ -1.79
PCF11O94913 SNORA81-201ENST00000408493 178 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC022022.1-201ENST00000430304 178 ntBASIC3.85□□□□□ -1.79
PCF11O94913 HMGN1P5-201ENST00000448591 263 ntBASIC3.85□□□□□ -1.79
PCF11O94913 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.85□□□□□ -1.79
PCF11O94913 AC103975.1-201ENST00000482506 483 ntBASIC3.85□□□□□ -1.79
PCF11O94913 LINC00888-204ENST00000487386 421 ntBASIC3.85□□□□□ -1.79
PCF11O94913 RN7SL636P-201ENST00000497504 294 ntBASIC3.85□□□□□ -1.79
PCF11O94913 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 236.2 ms