Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS4BO75351 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS4BO75351 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS4BO75351 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS4BO75351 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS4BO75351 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC114546.3-201ENST00000623582 1734 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS4BO75351 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS4BO75351 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS4BO75351 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC092447.10-201ENST00000620607 1652 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS4BO75351 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS4BO75351 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 RNU1-108P-201ENST00000362556 161 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 RNU6-744P-201ENST00000365557 107 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 RNU6-730P-201ENST00000383954 104 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 RNU6-1316P-201ENST00000384242 108 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 RNU1-82P-201ENST00000390851 165 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 U3.22-201ENST00000391120 215 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 RPS20P2-201ENST00000402520 389 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 Z98745.1-201ENST00000402553 494 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 RPL7P25-201ENST00000404151 721 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC012065.2-201ENST00000421295 375 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 RPL30P3-201ENST00000424262 333 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 MTND4P18-201ENST00000447010 465 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC005297.2-201ENST00000450430 606 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 NUTF2P7-201ENST00000453086 375 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC079168.2-201ENST00000453977 416 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 AURKAPS2-201ENST00000454983 333 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 RPL5P30-201ENST00000465511 891 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 RPL12P20-201ENST00000475538 479 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC013356.1-201ENST00000489027 564 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 MTAPP1-201ENST00000489154 819 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC093767.1-201ENST00000504523 156 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC108078.1-201ENST00000508073 725 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC091868.1-201ENST00000508746 304 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 RNU6-201P-201ENST00000517100 61 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC100770.1-201ENST00000532310 322 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS4BO75351 AL109766.1-201ENST00000555080 552 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 AL133241.1-201ENST00000556832 487 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC137800.2-201ENST00000574375 120 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 RN7SL690P-201ENST00000582087 240 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 MIR4512-201ENST00000583257 77 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS4BO75351 BBIP1P1-201ENST00000602999 279 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AL355073.2-201ENST00000612106 557 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 AC124864.2-201ENST00000624736 186 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 PISRT1-201ENST00000626175 531 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 OR52H1-202ENST00000641796 1061 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 IQCB2P-201ENST00000401788 1633 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS4BO75351 AL442639.1-201ENST00000625030 1899 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS4BO75351 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.49□□□□□ -1.69
VPS4BO75351 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS4BO75351 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS4BO75351 U8.3-201ENST00000363321 132 ntBASIC4.48□□□□□ -1.69
VPS4BO75351 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.48□□□□□ -1.69
VPS4BO75351 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS4BO75351 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS4BO75351 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms