Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RPS17P8-201ENST00000434525 335 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC104850.1-201ENST00000435940 476 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIN3BO60391 FAM103A2P-201ENST00000444122 354 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AL136380.1-201ENST00000447970 162 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 GAPDHP14-201ENST00000450472 937 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 TRBV26-201ENST00000456572 344 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 PMCHL2-203ENST00000457791 237 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 PABPC1P3-201ENST00000469174 459 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC023194.1-201ENST00000493084 308 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 NIFKP7-201ENST00000503365 834 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 RNU6-714P-201ENST00000516963 103 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIN3BO60391 AC022616.6-201ENST00000520479 119 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIN3BO60391 CENPUP1-201ENST00000526649 1202 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIN3BO60391 AL138976.2-201ENST00000563989 694 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIN3BO60391 AL353997.4-201ENST00000586196 166 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.76□□□□□ -1.49
GRIN3BO60391 HSPE1P14-201ENST00000605812 302 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC064836.2-201ENST00000609491 462 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.76□□□□□ -1.49
GRIN3BO60391 AC009237.17-201ENST00000618111 748 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.76□□□□□ -1.49
GRIN3BO60391 AC015908.5-201ENST00000623289 343 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 AC125336.1-201ENST00000508893 2827 ntBASIC5.76□□□□□ -1.49
GRIN3BO60391 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
GRIN3BO60391 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
GRIN3BO60391 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.75□□□□□ -1.49
GRIN3BO60391 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
GRIN3BO60391 SNORD56.2-201ENST00000363242 71 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 RNU6-343P-201ENST00000364709 104 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 RNU6-878P-201ENST00000384578 110 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 Y_RNA.535-201ENST00000384612 99 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 MIR92A2-201ENST00000385299 75 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 MRPL42P2-201ENST00000403169 426 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 RNU6-908P-201ENST00000410160 94 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 RN7SKP177-201ENST00000410567 355 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AL513185.2-201ENST00000425543 193 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 OR51AB1P-201ENST00000429046 620 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 RPL7AP49-201ENST00000429522 581 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AL591438.1-201ENST00000433508 581 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 RPL21P89-201ENST00000444021 467 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 RAD23BP3-201ENST00000454157 1152 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AP001025.2-201ENST00000490908 477 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AC146944.2-203ENST00000502493 354 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.75□□□□□ -1.49
GRIN3BO60391 NPM1P41-201ENST00000512920 831 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AC139495.1-202ENST00000513164 354 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 SNORA74D-201ENST00000516404 141 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 Vault.3-201ENST00000516676 95 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC022861.1-201ENST00000522981 663 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC105129.1-201ENST00000560250 297 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 SULT1C2P2-201ENST00000562517 294 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.75□□□□□ -1.49
GRIN3BO60391 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC007621.1-201ENST00000604544 437 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AL035413.2-201ENST00000604801 525 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 MIR98-201ENST00000606724 119 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 AC093788.1-201ENST00000609356 927 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 BX664608.1-201ENST00000610519 487 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 MIR6839-201ENST00000620425 113 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 AC019278.1-201ENST00000623516 479 ntBASIC5.75□□□□□ -1.49
GRIN3BO60391 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.75□□□□□ -1.49
GRIN3BO60391 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
GRIN3BO60391 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms