Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC104986.1-201ENST00000517978 436 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.71□□□□□ -1.66
NPHP1O15259 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.71□□□□□ -1.66
NPHP1O15259 OR5M7P-201ENST00000526140 972 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 OR5D17P-201ENST00000531492 978 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.71□□□□□ -1.66
NPHP1O15259 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.71□□□□□ -1.66
NPHP1O15259 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.71□□□□□ -1.66
NPHP1O15259 AC245036.5-201ENST00000596330 847 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 AC009974.1-201ENST00000608881 455 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.71□□□□□ -1.66
NPHP1O15259 AC018816.2-201ENST00000621460 353 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 AL078595.3-201ENST00000623815 1166 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.71□□□□□ -1.66
NPHP1O15259 MIR1322-201ENST00000638013 71 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPHP1O15259 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NPHP1O15259 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NPHP1O15259 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPHP1O15259 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.7□□□□□ -1.66
NPHP1O15259 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.7□□□□□ -1.66
NPHP1O15259 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.7□□□□□ -1.66
NPHP1O15259 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.7□□□□□ -1.66
NPHP1O15259 AL158156.1-201ENST00000422509 473 ntBASIC4.7□□□□□ -1.66
NPHP1O15259 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.7□□□□□ -1.66
NPHP1O15259 HMGB3P22-202ENST00000451823 572 ntBASIC4.7□□□□□ -1.66
NPHP1O15259 TRGVB-201ENST00000453257 471 ntBASIC4.7□□□□□ -1.66
NPHP1O15259 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.7□□□□□ -1.66
NPHP1O15259 AL445669.2-201ENST00000454425 421 ntBASIC4.7□□□□□ -1.66
NPHP1O15259 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.7□□□□□ -1.66
NPHP1O15259 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.7□□□□□ -1.66
NPHP1O15259 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.7□□□□□ -1.66
NPHP1O15259 AL139174.1-201ENST00000531489 886 ntBASIC4.7□□□□□ -1.66
NPHP1O15259 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.7□□□□□ -1.66
NPHP1O15259 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.7□□□□□ -1.66
NPHP1O15259 AC007687.1-201ENST00000602704 304 ntBASIC4.7□□□□□ -1.66
NPHP1O15259 RPL23AP92-201ENST00000603609 255 ntBASIC4.7□□□□□ -1.66
NPHP1O15259 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.7□□□□□ -1.66
NPHP1O15259 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.7□□□□□ -1.66
NPHP1O15259 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPHP1O15259 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.69□□□□□ -1.66
NPHP1O15259 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NPHP1O15259 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPHP1O15259 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPHP1O15259 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
NPHP1O15259 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.69□□□□□ -1.66
NPHP1O15259 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NPHP1O15259 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NPHP1O15259 AIMP1P1-201ENST00000418670 937 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.69□□□□□ -1.66
NPHP1O15259 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.69□□□□□ -1.66
NPHP1O15259 ELOCP13-201ENST00000443934 329 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 AC007967.1-201ENST00000455422 1159 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 UBDP1-202ENST00000457888 382 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 AC026410.2-201ENST00000460281 156 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 HMGB1P25-201ENST00000468402 607 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 RN7SL601P-201ENST00000471221 293 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.69□□□□□ -1.66
NPHP1O15259 HSPD1P15-201ENST00000505573 1122 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.69□□□□□ -1.66
NPHP1O15259 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.69□□□□□ -1.66
NPHP1O15259 RN7SKP13-201ENST00000515933 244 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 RNU6-27P-201ENST00000516146 107 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 RNU2-58P-201ENST00000516403 183 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 MTND2P32-201ENST00000521584 1038 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.69□□□□□ -1.66
NPHP1O15259 AC011611.1-201ENST00000552179 197 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 AC007599.1-201ENST00000568688 1174 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.69□□□□□ -1.66
NPHP1O15259 MIR4727-201ENST00000622232 55 ntBASIC4.69□□□□□ -1.66
NPHP1O15259 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.69□□□□□ -1.66
NPHP1O15259 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPHP1O15259 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPHP1O15259 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPHP1O15259 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NPHP1O15259 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPHP1O15259 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.68□□□□□ -1.66
NPHP1O15259 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPHP1O15259 AL365361.1-201ENST00000566942 3481 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NPHP1O15259 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPHP1O15259 Y_RNA.192-201ENST00000363977 102 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 SNORA72.3-201ENST00000365074 132 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.68□□□□□ -1.66
NPHP1O15259 RNU6-636P-201ENST00000384598 107 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 MIR490-201ENST00000384865 128 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 MTND2P5-201ENST00000432656 1006 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.68□□□□□ -1.66
NPHP1O15259 AL606517.1-201ENST00000446914 387 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 AC092451.1-201ENST00000480211 153 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 AC106872.2-201ENST00000494303 480 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.68□□□□□ -1.66
NPHP1O15259 RPL23AP55-201ENST00000498163 452 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPHP1O15259 AC026412.2-201ENST00000512270 1075 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPHP1O15259 EEF1B2P4-201ENST00000551398 348 ntBASIC4.68□□□□□ -1.66
NPHP1O15259 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.68□□□□□ -1.66
NPHP1O15259 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.68□□□□□ -1.66
NPHP1O15259 MIR4637-201ENST00000582405 84 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms