Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SNRPFP1-201ENST00000414761 252 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 HIGD1AP15-201ENST00000416198 280 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 UBE2D3P2-201ENST00000424409 445 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 RPL17P49-201ENST00000443728 411 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 SBDSP1-204ENST00000453858 737 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 RN7SL610P-201ENST00000463845 291 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AL139099.1-201ENST00000497398 403 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC025554.1-201ENST00000505641 188 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 SNORA70.16-201ENST00000516390 95 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AL163153.1-201ENST00000554223 283 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC084783.1-201ENST00000565846 910 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC105224.1-201ENST00000587055 421 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AL049539.1-201ENST00000611964 459 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 MIR8058-201ENST00000615737 89 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC009268.2-201ENST00000621925 457 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC079597.1-201ENST00000624306 508 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC008785.1-201ENST00000624475 456 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 AC008568.2-201ENST00000623862 2313 ntBASIC4.28□□□□□ -1.72
CCDC189A1A4V9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC189A1A4V9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.28□□□□□ -1.73
CCDC189A1A4V9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.28□□□□□ -1.73
CCDC189A1A4V9 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 RNU6-289P-201ENST00000364093 107 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 MIR550A3-201ENST00000390735 95 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 RPS3AP23-201ENST00000401762 784 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 MIR1179-201ENST00000408703 91 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 MTND1P21-201ENST00000412991 285 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AL139095.3-201ENST00000419672 1203 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 TMEM167AP1-201ENST00000423409 219 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 ARF4P2-201ENST00000430209 526 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC112653.1-201ENST00000443851 386 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 MTCO1P27-201ENST00000448269 226 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 RAD23BP3-201ENST00000454157 1152 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 DHFRP3-201ENST00000455595 559 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC104685.1-201ENST00000502445 371 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC017037.1-201ENST00000508460 471 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC068587.4-201ENST00000533893 186 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC006064.5-201ENST00000541782 248 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 FAM25E-202ENST00000608562 189 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC072039.2-201ENST00000608883 439 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC009570.1-201ENST00000609599 745 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AL450472.3-201ENST00000615578 367 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 MIR6076-201ENST00000617521 113 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 uc_338.13-201ENST00000618243 179 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC244258.1-201ENST00000637553 1071 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 AC103706.2-201ENST00000638080 240 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 FP325313.1-201ENST00000638228 703 ntBASIC4.27□□□□□ -1.73
CCDC189A1A4V9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC189A1A4V9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC189A1A4V9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC189A1A4V9 SNORD113-6-201ENST00000363345 75 ntBASIC4.26□□□□□ -1.73
CCDC189A1A4V9 RNU6-76P-201ENST00000384060 104 ntBASIC4.26□□□□□ -1.73
CCDC189A1A4V9 SNORA1.3-201ENST00000384676 136 ntBASIC4.26□□□□□ -1.73
CCDC189A1A4V9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC189A1A4V9 SNORD66.1-201ENST00000391230 76 ntBASIC4.26□□□□□ -1.73
CCDC189A1A4V9 U3.42-201ENST00000408746 214 ntBASIC4.26□□□□□ -1.73
CCDC189A1A4V9 MTCO1P17-201ENST00000411522 491 ntBASIC4.26□□□□□ -1.73
CCDC189A1A4V9 PIGPP2-201ENST00000411569 458 ntBASIC4.26□□□□□ -1.73
CCDC189A1A4V9 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms