Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MTND4P5-201ENST00000435821 1374 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 OR11H5P-202ENST00000641612 1325 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 OR11H4-201ENST00000315409 1082 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 RNU5F-7P-201ENST00000363696 115 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-192P-201ENST00000391253 100 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 MTCYBP36-201ENST00000404146 440 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 RN7SKP56-201ENST00000410513 331 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 HSPE1P12-201ENST00000412576 301 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC004987.3-201ENST00000413879 771 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL031779.1-201ENST00000415663 330 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL445669.1-201ENST00000426743 755 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL035410.1-201ENST00000427409 427 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 KCTD9P3-201ENST00000434597 1169 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL356276.2-201ENST00000435919 558 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 TBCAP1-201ENST00000436520 327 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC002381.1-201ENST00000447049 280 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC239367.2-201ENST00000447309 705 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC005297.2-201ENST00000450430 606 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 RPS11P1-201ENST00000451072 473 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC104563.1-201ENST00000476147 376 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 RPS27AP13-201ENST00000498403 237 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 OR5H5P-201ENST00000503164 928 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC034159.1-201ENST00000513885 583 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL391156.1-201ENST00000554965 554 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 MIR4330-201ENST00000579077 105 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC090312.1-201ENST00000580637 348 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC005771.1-201ENST00000585581 349 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 OR4G1P-201ENST00000588632 938 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC087683.1-201ENST00000591187 441 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 YWHAQP7-201ENST00000603536 658 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC080078.2-201ENST00000603766 501 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC027807.2-201ENST00000616099 408 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL359740.1-201ENST00000624340 592 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC093591.3-201ENST00000634516 308 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL049555.1-201ENST00000562834 1933 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 RNA5SP399-201ENST00000364003 117 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 RNU5E-5P-201ENST00000365379 116 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 U8.14-201ENST00000390843 143 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 RN7SKP33-201ENST00000410942 340 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 GLRXP1-201ENST00000423261 334 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL590233.1-201ENST00000430017 456 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 EZH2P1-201ENST00000431167 291 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 MTND1P34-201ENST00000438556 671 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AF228730.2-201ENST00000438784 848 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 GDI2P2-201ENST00000445131 608 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 CDC27P1-201ENST00000445384 715 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 FABP3P2-201ENST00000453169 399 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 OR6K1P-201ENST00000456766 971 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 UQCRHP4-201ENST00000471686 272 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms