Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AL355596.1-201ENST00000565399 3996 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 MIR26A1-201ENST00000362205 77 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC104332.2-201ENST00000429959 156 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 YWHAZP7-201ENST00000436906 631 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 RPL7P29-201ENST00000437151 728 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AL513043.1-201ENST00000439124 535 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 GAPDHP27-201ENST00000447427 1020 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC017015.1-201ENST00000477387 286 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 RNU6-491P-201ENST00000516099 110 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 RNA5SP341-201ENST00000516261 117 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 SNORA26.10-201ENST00000516427 141 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC107954.1-201ENST00000565906 727 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC012182.1-201ENST00000570133 895 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AL009028.1-201ENST00000604895 802 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC007179.3-201ENST00000604976 235 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC096577.2-201ENST00000611455 153 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 AC084035.1-201ENST00000634543 607 ntBASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS29Q9UBQ0 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AP002907.1-201ENST00000606361 1430 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 U8.9-201ENST00000365667 134 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 SNORA26.7-201ENST00000391288 122 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AL590004.2-201ENST00000404787 371 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 RNU6-1077P-201ENST00000410506 102 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 RNA5SP344-201ENST00000411081 104 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC010385.1-201ENST00000412374 256 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 YPEL5P1-201ENST00000419731 367 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 RPL35AP12-201ENST00000425362 338 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC093151.1-201ENST00000427711 313 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AL390023.1-201ENST00000428836 262 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC127537.2-201ENST00000439258 465 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 RPL21P2-201ENST00000440049 481 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AL590639.1-201ENST00000456484 337 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC003982.1-202ENST00000469928 248 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC087879.1-201ENST00000474343 374 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 DYNLL1P6-201ENST00000503440 264 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC025459.1-201ENST00000504072 156 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC117522.3-201ENST00000507974 584 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 ZNF861P-201ENST00000588126 639 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC073387.2-201ENST00000604797 784 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC107871.2-201ENST00000612894 502 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC006111.3-201ENST00000622137 383 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 MAPK10-322ENST00000641485 4530 ntBASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS29Q9UBQ0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 SNORA48.5-201ENST00000391143 135 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 MIR1303-201ENST00000408625 86 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 RNU4-65P-201ENST00000410473 140 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 RNU4-74P-201ENST00000411280 161 ntBASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS29Q9UBQ0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms