Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RPL7AP28-201ENST00000464513 571 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC010285.1-201ENST00000470580 392 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC110792.1-201ENST00000491826 472 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC096751.1-202ENST00000502691 1067 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC026402.1-201ENST00000513642 170 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC109635.4-202ENST00000531666 412 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 MIR5697-201ENST00000578045 78 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 RN7SL176P-201ENST00000580352 264 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 TPMTP1-201ENST00000592307 737 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC104010.1-201ENST00000616889 150 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC068724.3-201ENST00000625906 87 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 MTND5P33-201ENST00000571250 1450 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.21□□□□□ -1.74
LRFN1Q9P244 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 AC011460.1-201ENST00000636268 1834 ntBASIC4.21□□□□□ -1.74
LRFN1Q9P244 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LRFN1Q9P244 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 MFSD8-242ENST00000641690 4199 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN1Q9P244 FRG1BP-201ENST00000278882 761 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 Y_RNA.318-201ENST00000365131 97 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 RNU5E-5P-201ENST00000365379 116 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 RNU6-1181P-201ENST00000384191 106 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 SNORD3H-201ENST00000384486 214 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 MIR708-201ENST00000390708 88 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 CCDC58P2-201ENST00000417131 366 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 RPL7AP25-201ENST00000423357 805 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 CKS1BP6-201ENST00000424932 240 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 RPS17P13-201ENST00000448974 407 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 NUTF2P7-201ENST00000453086 375 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 RNA5SP269-201ENST00000459032 137 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 RPL21P126-201ENST00000470049 478 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 FABP5P5-201ENST00000515537 406 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 Y_RNA.695-201ENST00000516715 107 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 AP004242.1-201ENST00000533701 349 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN1Q9P244 SNORD84-203ENST00000584275 78 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC146944.4-201ENST00000602697 718 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC068276.1-201ENST00000605793 379 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 SNORD91B-202ENST00000608459 222 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AL590282.1-201ENST00000610379 1136 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC012409.3-201ENST00000611343 981 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC027807.2-201ENST00000616099 408 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AC015967.1-201ENST00000619893 476 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 AL161637.1-201ENST00000622380 412 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LRFN1Q9P244 USP8P1-201ENST00000494673 3183 ntBASIC4.2□□□□□ -1.74
LRFN1Q9P244 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.2□□□□□ -1.74
LRFN1Q9P244 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LRFN1Q9P244 RNU6-1074P-201ENST00000383995 104 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 RNU6-114P-201ENST00000384704 105 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 MIR135A2-201ENST00000384854 100 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 SNORD115.1-201ENST00000391109 76 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AL121834.1-202ENST00000404494 277 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 RPS7P13-201ENST00000413955 498 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AL356387.2-201ENST00000422272 243 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 MTCO2P16-201ENST00000436962 677 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC104651.2-201ENST00000447549 528 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC098824.1-201ENST00000453565 980 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 ISCUP1-201ENST00000454451 448 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 SNRPGP9-201ENST00000456025 225 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 SNRPFP4-201ENST00000456366 242 ntBASIC4.19□□□□□ -1.74
LRFN1Q9P244 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.19□□□□□ -1.74
LRFN1Q9P244 CYCSP34-201ENST00000458172 304 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms