Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 RNU6-1243P-201ENST00000364028 107 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 RNU6-784P-201ENST00000384330 106 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 MIR1271-201ENST00000408537 86 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 OR6C66P-201ENST00000414917 930 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 OR2AH1P-201ENST00000425717 928 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 COX6CP15-201ENST00000426313 211 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 RPL21P23-201ENST00000446654 460 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 AL353691.1-201ENST00000451332 387 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 DHFRP3-201ENST00000455595 559 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 SNORD121B-201ENST00000458838 81 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC073073.1-201ENST00000493920 463 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 Y_RNA.654-201ENST00000497848 106 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 HMGB3P16-201ENST00000508037 287 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 RPS27AP18-201ENST00000515536 459 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 RNA5SP503-201ENST00000517047 117 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 RNA5SP454-201ENST00000517231 127 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 RN7SL708P-201ENST00000580952 299 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC011373.1-201ENST00000607270 237 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AL390240.1-201ENST00000612950 384 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 AC090510.2-201ENST00000617465 629 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 THAP12P4-201ENST00000528321 2266 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSU72Q9NP77 AL442639.1-201ENST00000625030 1899 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.28□□□□□ -1.56
SSU72Q9NP77 SRRM1P3-201ENST00000426911 2678 ntBASIC5.28□□□□□ -1.56
SSU72Q9NP77 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC007342.5-201ENST00000571340 2142 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 MTND5P19-201ENST00000424872 1794 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSU72Q9NP77 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSU72Q9NP77 RNA5SP223-201ENST00000365174 120 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 UBBP2-201ENST00000376781 231 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSU72Q9NP77 RNU6-641P-201ENST00000384006 107 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 RNU6-985P-201ENST00000410182 104 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 RN7SKP58-201ENST00000411010 305 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC114482.1-201ENST00000418010 247 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC005019.1-201ENST00000436455 431 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 RPL21P133-201ENST00000443666 476 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC011225.1-201ENST00000457751 369 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 SNRPFP3-201ENST00000457792 225 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 snoU13.7-201ENST00000459220 104 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 RNA5SP103-201ENST00000459503 118 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AL591473.1-201ENST00000464297 313 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 TRBV1-201ENST00000476502 284 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC058823.1-201ENST00000485315 474 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms