Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-202P-201ENST00000515998 96 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 RNU1-143P-201ENST00000516296 146 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 HIGD1AP6-201ENST00000521833 279 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 MIR4474-201ENST00000579189 78 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 OR4G1P-201ENST00000588632 938 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 U1.23-201ENST00000610293 146 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AL590282.1-201ENST00000610379 1136 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 RNU1-68P-201ENST00000615382 146 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 U1.39-201ENST00000621562 146 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ECHDC3Q96DC8 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 SFR1P1-201ENST00000403720 688 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 RPS7P13-201ENST00000413955 498 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 DPPA2P1-201ENST00000428060 556 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 RPL23AP69-201ENST00000431134 458 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AC010881.1-201ENST00000433830 235 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 HIGD1AP11-201ENST00000438361 280 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 RN7SL442P-201ENST00000473804 320 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AC017015.1-201ENST00000477387 286 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 MTCO3P35-201ENST00000485582 781 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AC108078.3-201ENST00000502633 489 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 RNF138P1-201ENST00000502765 546 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 HMGB1P22-201ENST00000505315 124 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AC107954.1-201ENST00000565906 727 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 MIR3200-201ENST00000580767 85 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 AL354696.1-201ENST00000614652 497 ntBASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ECHDC3Q96DC8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 RPL7P26-201ENST00000333817 754 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 RNU6-50P-201ENST00000362356 103 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 RNU6-77P-201ENST00000410554 91 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 RNU4-27P-201ENST00000410889 139 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 FAM204CP-201ENST00000424489 642 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 RPL23AP83-201ENST00000434984 473 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC108734.1-201ENST00000439549 399 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 MTND2P30-201ENST00000456663 382 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC026427.2-201ENST00000506228 536 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC104057.1-201ENST00000515547 497 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 IGKV2D-36-201ENST00000518643 226 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AP001207.2-201ENST00000519490 539 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AP000916.1-201ENST00000533869 835 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AL671309.1-201ENST00000603750 544 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 PRELID3BP8-201ENST00000604148 295 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC016542.1-201ENST00000608259 493 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC099506.2-201ENST00000623074 221 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 AC116096.1-201ENST00000566804 2314 ntBASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.14□□□□□ -1.91
ECHDC3Q96DC8 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ECHDC3Q96DC8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.13□□□□□ -1.91
ECHDC3Q96DC8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ECHDC3Q96DC8 DEFB109C-201ENST00000382575 264 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms