Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC020910.3-201ENST00000603701 874 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC010900.2-201ENST00000604508 210 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 HMGN2P28-201ENST00000606102 262 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 PABPC1P6-201ENST00000445594 1829 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AC008669.1-201ENST00000565823 2178 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 SRRM1P3-201ENST00000426911 2678 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AP004607.3-201ENST00000530354 3915 ntBASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NKX2-3Q8TAU0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AL121886.1-201ENST00000358609 435 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 RNU1-59P-201ENST00000364829 162 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 MIR223-201ENST00000385204 110 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AC097374.1-203ENST00000400783 485 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 RPL23AP17-201ENST00000401064 499 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AL035090.1-201ENST00000454835 332 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 FTH1P2-201ENST00000466086 412 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AP006587.4-201ENST00000526053 529 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 HMGN2P6-201ENST00000551091 273 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AL031320.1-201ENST00000604177 357 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 BX284668.6-201ENST00000606899 438 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 MIR6820-201ENST00000611508 62 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 U1.25-201ENST00000614085 162 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AL139099.4-201ENST00000614802 114 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 RN7SL544P-201ENST00000617232 284 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 U1.31-201ENST00000620022 160 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 RN7SL763P-201ENST00000620922 284 ntBASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.81□□□□□ -1.32
NKX2-3Q8TAU0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 RNU6-179P-201ENST00000363350 107 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 Y_RNA.170-201ENST00000363746 110 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 RNA5SP91-201ENST00000390902 119 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 MRPL35P1-201ENST00000404272 572 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 RNU4-46P-201ENST00000410818 138 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 RPL12P3-201ENST00000440080 396 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 HMGN3P1-201ENST00000453847 193 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AL136097.1-201ENST00000456945 913 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 LINC01399-202ENST00000458450 244 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 RPL9P32-201ENST00000464118 620 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 RPL23AP71-201ENST00000470966 469 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 RPL7P49-201ENST00000471402 708 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 DUTP1-201ENST00000493631 470 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 RNU6-897P-201ENST00000517135 105 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 SETP2-201ENST00000553886 926 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AC127381.1-201ENST00000555979 939 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AC090517.1-201ENST00000569307 266 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AC024614.2-201ENST00000577584 372 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 FKBP1AP1-201ENST00000594588 318 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms