Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU2-43P-201ENST00000410306 190 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AC015977.1-201ENST00000418887 292 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AL160275.3-201ENST00000423876 471 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 GAPDHP23-201ENST00000444823 993 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 RPS27AP3-201ENST00000453803 454 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AC084198.1-201ENST00000477747 402 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 SCARNA5-201ENST00000516201 276 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 NRBF2P4-201ENST00000520874 850 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 OR4H12P-201ENST00000556269 907 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 MIR3157-201ENST00000578688 85 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 MIR6778-201ENST00000617912 73 ntBASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
DEPDC4Q8N2C3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 GUCY1B2-204ENST00000531898 1979 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RN7SKP171-201ENST00000364417 303 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RNA5SP485-201ENST00000365053 119 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 Y_RNA.473-201ENST00000384333 102 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 MIR433-201ENST00000384837 93 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 U3.25-201ENST00000391209 220 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RPS4XP7-201ENST00000406274 780 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RNU6-55P-201ENST00000411092 107 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RN7SKP17-201ENST00000411242 351 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 DPH3P2-201ENST00000422618 250 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 USP9YP30-201ENST00000430729 455 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RHOT1P3-201ENST00000436571 331 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC234771.2-201ENST00000445718 597 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 VPS25P1-201ENST00000455691 508 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 HMGB3P30-201ENST00000457863 606 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RNU7-138P-201ENST00000459479 64 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RN7SL643P-201ENST00000471845 291 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC090686.1-201ENST00000481577 749 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RN7SL568P-201ENST00000493069 298 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 SCARNA16.2-201ENST00000516520 172 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RNU6-264P-201ENST00000517134 104 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC005519.1-201ENST00000554490 601 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 MIR3189-201ENST00000578735 73 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RN7SL230P-201ENST00000580835 303 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 AC012669.1-201ENST00000603209 283 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 NUTF2P8-201ENST00000604593 363 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 SDR42E1P2-201ENST00000614861 481 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 FANCD2P2-201ENST00000437591 1400 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 OR9K1P-202ENST00000641111 3217 ntBASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
DEPDC4Q8N2C3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms