Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.39□□□□□ -1.87
ACLYP53396 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ACLYP53396 SNORA7.2-201ENST00000364446 145 ntBASIC3.39□□□□□ -1.87
ACLYP53396 MIR607-201ENST00000385241 96 ntBASIC3.39□□□□□ -1.87
ACLYP53396 EIF5P1-201ENST00000400019 1231 ntBASIC3.39□□□□□ -1.87
ACLYP53396 RNA5SP184-201ENST00000411071 108 ntBASIC3.39□□□□□ -1.87
ACLYP53396 AC069218.2-201ENST00000411665 344 ntBASIC3.39□□□□□ -1.87
ACLYP53396 RPL31P2-201ENST00000413849 377 ntBASIC3.39□□□□□ -1.87
ACLYP53396 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.39□□□□□ -1.87
ACLYP53396 RPL32P28-201ENST00000443577 397 ntBASIC3.39□□□□□ -1.87
ACLYP53396 RPS26P56-201ENST00000444468 240 ntBASIC3.39□□□□□ -1.87
ACLYP53396 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.39□□□□□ -1.87
ACLYP53396 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
ACLYP53396 SNRPGP3-201ENST00000469405 227 ntBASIC3.39□□□□□ -1.87
ACLYP53396 AC087879.1-201ENST00000474343 374 ntBASIC3.39□□□□□ -1.87
ACLYP53396 RPL31P13-201ENST00000484151 370 ntBASIC3.39□□□□□ -1.87
ACLYP53396 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.39□□□□□ -1.87
ACLYP53396 RNU6-202P-201ENST00000515998 96 ntBASIC3.39□□□□□ -1.87
ACLYP53396 AL731537.2-201ENST00000561565 951 ntBASIC3.39□□□□□ -1.87
ACLYP53396 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.39□□□□□ -1.87
ACLYP53396 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.39□□□□□ -1.87
ACLYP53396 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.39□□□□□ -1.87
ACLYP53396 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.39□□□□□ -1.87
ACLYP53396 SNRPGP15-201ENST00000600149 222 ntBASIC3.39□□□□□ -1.87
ACLYP53396 AL365503.1-201ENST00000605247 905 ntBASIC3.39□□□□□ -1.87
ACLYP53396 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.39□□□□□ -1.87
ACLYP53396 AC003001.2-201ENST00000616294 831 ntBASIC3.39□□□□□ -1.87
ACLYP53396 U73479.1-201ENST00000618062 168 ntBASIC3.39□□□□□ -1.87
ACLYP53396 AL163051.2-201ENST00000618976 735 ntBASIC3.39□□□□□ -1.87
ACLYP53396 AL592494.2-201ENST00000425455 1548 ntBASIC3.39□□□□□ -1.87
ACLYP53396 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ACLYP53396 MTND4P21-201ENST00000453886 1357 ntBASIC3.38□□□□□ -1.87
ACLYP53396 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.38□□□□□ -1.87
ACLYP53396 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.38□□□□□ -1.87
ACLYP53396 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
ACLYP53396 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ACLYP53396 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ACLYP53396 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
ACLYP53396 RNU6-335P-201ENST00000364563 113 ntBASIC3.38□□□□□ -1.87
ACLYP53396 ATP5F1P6-201ENST00000402768 767 ntBASIC3.38□□□□□ -1.87
ACLYP53396 ATF1P1-201ENST00000406040 927 ntBASIC3.38□□□□□ -1.87
ACLYP53396 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.38□□□□□ -1.87
ACLYP53396 AC073264.1-201ENST00000411508 416 ntBASIC3.38□□□□□ -1.87
ACLYP53396 RPL31P12-201ENST00000422587 358 ntBASIC3.38□□□□□ -1.87
ACLYP53396 AC073508.1-201ENST00000428866 656 ntBASIC3.38□□□□□ -1.87
ACLYP53396 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ACLYP53396 MTCO3P43-201ENST00000440974 771 ntBASIC3.38□□□□□ -1.87
ACLYP53396 RPS24P13-201ENST00000442520 397 ntBASIC3.38□□□□□ -1.87
ACLYP53396 RNFT1P2-201ENST00000443064 757 ntBASIC3.38□□□□□ -1.87
ACLYP53396 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.38□□□□□ -1.87
ACLYP53396 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.38□□□□□ -1.87
ACLYP53396 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.38□□□□□ -1.87
ACLYP53396 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.38□□□□□ -1.87
ACLYP53396 AC117440.1-201ENST00000474107 571 ntBASIC3.38□□□□□ -1.87
ACLYP53396 AC021205.2-201ENST00000480069 347 ntBASIC3.38□□□□□ -1.87
ACLYP53396 TRAV31-201ENST00000502780 342 ntBASIC3.38□□□□□ -1.87
ACLYP53396 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.38□□□□□ -1.87
ACLYP53396 HIGD1AP13-201ENST00000509878 289 ntBASIC3.38□□□□□ -1.87
ACLYP53396 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.38□□□□□ -1.87
ACLYP53396 SNORA76.2-201ENST00000517095 137 ntBASIC3.38□□□□□ -1.87
ACLYP53396 COX6CP8-201ENST00000522620 226 ntBASIC3.38□□□□□ -1.87
ACLYP53396 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.38□□□□□ -1.87
ACLYP53396 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.38□□□□□ -1.87
ACLYP53396 ZNF192P1-203ENST00000565888 810 ntBASIC3.38□□□□□ -1.87
ACLYP53396 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.38□□□□□ -1.87
ACLYP53396 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.38□□□□□ -1.87
ACLYP53396 HMGB1P6-201ENST00000569046 646 ntBASIC3.38□□□□□ -1.87
ACLYP53396 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.38□□□□□ -1.87
ACLYP53396 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.38□□□□□ -1.87
ACLYP53396 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.38□□□□□ -1.87
ACLYP53396 VN1R90P-201ENST00000595717 726 ntBASIC3.38□□□□□ -1.87
ACLYP53396 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.38□□□□□ -1.87
ACLYP53396 NRBF2P5-201ENST00000603087 788 ntBASIC3.38□□□□□ -1.87
ACLYP53396 ATP1B3P1-201ENST00000605365 821 ntBASIC3.38□□□□□ -1.87
ACLYP53396 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.38□□□□□ -1.87
ACLYP53396 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.38□□□□□ -1.87
ACLYP53396 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.38□□□□□ -1.87
ACLYP53396 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
ACLYP53396 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.38□□□□□ -1.87
ACLYP53396 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.38□□□□□ -1.87
ACLYP53396 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ACLYP53396 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACLYP53396 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
ACLYP53396 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACLYP53396 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.37□□□□□ -1.87
ACLYP53396 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACLYP53396 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ACLYP53396 AC062016.1-201ENST00000355719 319 ntBASIC3.37□□□□□ -1.87
ACLYP53396 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
ACLYP53396 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ACLYP53396 RNU6-1151P-201ENST00000384684 107 ntBASIC3.37□□□□□ -1.87
ACLYP53396 AL445529.1-201ENST00000398713 389 ntBASIC3.37□□□□□ -1.87
ACLYP53396 NUP35P1-201ENST00000422734 947 ntBASIC3.37□□□□□ -1.87
ACLYP53396 RPL21P112-201ENST00000434403 463 ntBASIC3.37□□□□□ -1.87
ACLYP53396 HMGB3P11-201ENST00000440127 604 ntBASIC3.37□□□□□ -1.87
ACLYP53396 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.37□□□□□ -1.87
ACLYP53396 RPS26P30-201ENST00000443431 335 ntBASIC3.37□□□□□ -1.87
ACLYP53396 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.37□□□□□ -1.87
ACLYP53396 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.37□□□□□ -1.87
ACLYP53396 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms