Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MIR432-201ENST00000606207 94 ntBASIC5.22□□□□□ -1.57
MRE11P49959 MIR6853-201ENST00000619642 74 ntBASIC5.22□□□□□ -1.57
MRE11P49959 AC138649.3-201ENST00000622154 254 ntBASIC5.22□□□□□ -1.57
MRE11P49959 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.22□□□□□ -1.57
MRE11P49959 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MRE11P49959 ZFRP1-201ENST00000457579 2970 ntBASIC5.22□□□□□ -1.57
MRE11P49959 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.21□□□□□ -1.57
MRE11P49959 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
MRE11P49959 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MRE11P49959 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MRE11P49959 AC114546.3-201ENST00000623582 1734 ntBASIC5.21□□□□□ -1.58
MRE11P49959 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
MRE11P49959 Y_RNA.25-201ENST00000362528 102 ntBASIC5.21□□□□□ -1.58
MRE11P49959 RNU5E-5P-201ENST00000365379 116 ntBASIC5.21□□□□□ -1.58
MRE11P49959 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
MRE11P49959 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.21□□□□□ -1.58
MRE11P49959 SNORA40.3-201ENST00000390964 122 ntBASIC5.21□□□□□ -1.58
MRE11P49959 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
MRE11P49959 CIR1P3-201ENST00000405137 479 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AL590290.1-201ENST00000405336 380 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.21□□□□□ -1.58
MRE11P49959 AC109780.2-201ENST00000413467 845 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AL136133.1-201ENST00000413694 376 ntBASIC5.21□□□□□ -1.58
MRE11P49959 HMGB3P23-201ENST00000414981 585 ntBASIC5.21□□□□□ -1.58
MRE11P49959 RPS23P10-201ENST00000416185 486 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.21□□□□□ -1.58
MRE11P49959 AL109913.1-201ENST00000421173 514 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AL645608.4-201ENST00000423619 154 ntBASIC5.21□□□□□ -1.58
MRE11P49959 RPL23AP1-201ENST00000428990 471 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.21□□□□□ -1.58
MRE11P49959 MTATP6P30-201ENST00000443540 664 ntBASIC5.21□□□□□ -1.58
MRE11P49959 RPL7P36-201ENST00000444633 681 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.21□□□□□ -1.58
MRE11P49959 SNRPFP4-201ENST00000456366 242 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AC146507.1-201ENST00000468335 354 ntBASIC5.21□□□□□ -1.58
MRE11P49959 RPL7L1P8-201ENST00000469911 741 ntBASIC5.21□□□□□ -1.58
MRE11P49959 OR52A4P-201ENST00000472867 958 ntBASIC5.21□□□□□ -1.58
MRE11P49959 LARP1BP2-201ENST00000486594 519 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.21□□□□□ -1.58
MRE11P49959 RNA5SP43-201ENST00000516559 110 ntBASIC5.21□□□□□ -1.58
MRE11P49959 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.21□□□□□ -1.58
MRE11P49959 PAICSP4-201ENST00000517543 1253 ntBASIC5.21□□□□□ -1.58
MRE11P49959 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.21□□□□□ -1.58
MRE11P49959 PDCD5P1-201ENST00000543528 309 ntBASIC5.21□□□□□ -1.58
MRE11P49959 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
MRE11P49959 OR6C73P-201ENST00000546432 358 ntBASIC5.21□□□□□ -1.58
MRE11P49959 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.21□□□□□ -1.58
MRE11P49959 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.21□□□□□ -1.58
MRE11P49959 AC090312.1-201ENST00000580637 348 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.21□□□□□ -1.58
MRE11P49959 AC022916.3-201ENST00000592961 742 ntBASIC5.21□□□□□ -1.58
MRE11P49959 MEMO1P5-201ENST00000604810 406 ntBASIC5.21□□□□□ -1.58
MRE11P49959 AC015726.3-201ENST00000624501 418 ntBASIC5.21□□□□□ -1.58
MRE11P49959 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
MRE11P49959 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MRE11P49959 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
MRE11P49959 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.21□□□□□ -1.58
MRE11P49959 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MRE11P49959 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.2□□□□□ -1.58
MRE11P49959 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.2□□□□□ -1.58
MRE11P49959 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.2□□□□□ -1.58
MRE11P49959 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MRE11P49959 RNA5SP502-201ENST00000362694 119 ntBASIC5.2□□□□□ -1.58
MRE11P49959 RNU6-216P-201ENST00000363282 104 ntBASIC5.2□□□□□ -1.58
MRE11P49959 RNU1-63P-201ENST00000383902 164 ntBASIC5.2□□□□□ -1.58
MRE11P49959 SNORA51.12-201ENST00000384448 134 ntBASIC5.2□□□□□ -1.58
MRE11P49959 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MRE11P49959 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MRE11P49959 RPL23AP48-201ENST00000406913 488 ntBASIC5.2□□□□□ -1.58
MRE11P49959 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.2□□□□□ -1.58
MRE11P49959 HMGB1P11-201ENST00000413899 637 ntBASIC5.2□□□□□ -1.58
MRE11P49959 CRYBB2P1-203ENST00000415709 538 ntBASIC5.2□□□□□ -1.58
MRE11P49959 USP9YP13-201ENST00000417797 480 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC092634.6-201ENST00000418558 192 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC048351.1-201ENST00000420064 602 ntBASIC5.2□□□□□ -1.58
MRE11P49959 RPS27AP14-201ENST00000422868 454 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AL953862.1-201ENST00000423016 168 ntBASIC5.2□□□□□ -1.58
MRE11P49959 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.2□□□□□ -1.58
MRE11P49959 MTND3P23-201ENST00000431980 347 ntBASIC5.2□□□□□ -1.58
MRE11P49959 HMGB1P31-201ENST00000437242 427 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AL662791.1-201ENST00000441992 928 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC112653.1-201ENST00000443851 386 ntBASIC5.2□□□□□ -1.58
MRE11P49959 Z99127.3-201ENST00000448158 395 ntBASIC5.2□□□□□ -1.58
MRE11P49959 SLC31A1P1-201ENST00000451221 567 ntBASIC5.2□□□□□ -1.58
MRE11P49959 RPL26P28-201ENST00000451325 435 ntBASIC5.2□□□□□ -1.58
MRE11P49959 APOOP2-201ENST00000461561 539 ntBASIC5.2□□□□□ -1.58
MRE11P49959 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.2□□□□□ -1.58
MRE11P49959 RPL12P20-201ENST00000475538 479 ntBASIC5.2□□□□□ -1.58
MRE11P49959 RN7SL244P-201ENST00000493405 297 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.2□□□□□ -1.58
MRE11P49959 AC114781.4-201ENST00000513707 639 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.2□□□□□ -1.58
MRE11P49959 SNORA48.10-201ENST00000516965 160 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC027309.2-201ENST00000520566 192 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.2□□□□□ -1.58
MRE11P49959 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms