Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CCDC58P3-201ENST00000590792 430 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC008739.3-201ENST00000603262 127 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AC011468.4-201ENST00000603942 409 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCLP35914 OR8B1P-202ENST00000641132 1178 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HMGCLP35914 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 AL157700.1-201ENST00000561973 1432 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCLP35914 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCLP35914 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
HMGCLP35914 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
HMGCLP35914 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.86
HMGCLP35914 MTND5P31-201ENST00000419366 1374 ntBASIC3.4□□□□□ -1.86
HMGCLP35914 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMGCLP35914 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMGCLP35914 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCLP35914 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HMGCLP35914 snoZ40.1-201ENST00000364540 72 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGCLP35914 Y_RNA.578-201ENST00000390903 88 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCLP35914 AC004987.3-201ENST00000413879 771 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 RPS7P15-201ENST00000415804 584 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 RPS3AP37-201ENST00000419176 745 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC069157.1-201ENST00000421749 137 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 RPL7P44-201ENST00000424827 742 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC092648.1-201ENST00000425870 423 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 RAC1P8-201ENST00000427086 527 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC008065.1-201ENST00000428525 348 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AL513175.1-201ENST00000431492 780 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 USP9YP24-201ENST00000434374 697 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGCLP35914 B3GNT2P1-201ENST00000434960 952 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 USP9YP17-201ENST00000444617 696 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 VN1R34P-201ENST00000447387 883 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC008264.1-201ENST00000447612 367 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGCLP35914 RPS15AP1-201ENST00000457423 391 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 NF1P3-201ENST00000457709 450 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC146507.1-201ENST00000468335 354 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC021205.2-201ENST00000480069 347 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCLP35914 AC112198.1-201ENST00000505369 1220 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCLP35914 AC048346.1-201ENST00000510247 144 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 IGHV3-76-201ENST00000522465 295 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCLP35914 OR4R3P-201ENST00000525084 838 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGCLP35914 AL139174.1-201ENST00000531489 886 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC007458.1-201ENST00000542812 373 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 MTND1P24-201ENST00000552175 861 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGCLP35914 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGCLP35914 MIR3912-201ENST00000577566 105 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC010928.3-201ENST00000587712 541 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 MTCO2P2-201ENST00000591258 225 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AP001542.2-201ENST00000593141 364 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 VN1R83P-201ENST00000595685 445 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AL355365.1-201ENST00000616480 294 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 AC008993.2-201ENST00000631744 806 ntBASIC3.4□□□□□ -1.87
HMGCLP35914 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCLP35914 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCLP35914 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCLP35914 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCLP35914 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCLP35914 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCLP35914 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCLP35914 AC107081.3-201ENST00000612715 2034 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCLP35914 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCLP35914 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCLP35914 AP005901.5-201ENST00000545779 1796 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 RNU6-251P-201ENST00000363235 104 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 RNA5SP391-201ENST00000363456 119 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 RNA5SP50-201ENST00000363731 107 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 RNU4-92P-201ENST00000363783 136 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HMGCLP35914 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
HMGCLP35914 SNORA48.7-201ENST00000391302 135 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 ERHP2-201ENST00000402323 299 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 RPL31P2-201ENST00000413849 377 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 Z99755.1-201ENST00000414048 380 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 AL592310.1-201ENST00000414330 671 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 LUZP4P1-201ENST00000415420 344 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGCLP35914 AC233981.1-201ENST00000423224 461 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCLP35914 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCLP35914 AC004022.1-201ENST00000447766 1066 ntBASIC3.39□□□□□ -1.87
HMGCLP35914 NPM1P49-201ENST00000448027 714 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms