Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH1P12830 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH1P12830 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH1P12830 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDH1P12830 LINC00561-201ENST00000565815 2738 ntBASIC3.84□□□□□ -1.8
CDH1P12830 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 UBE3AP2-201ENST00000429033 2259 ntBASIC3.83□□□□□ -1.8
CDH1P12830 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH1P12830 TNPO1P3-201ENST00000436471 2662 ntBASIC3.83□□□□□ -1.8
CDH1P12830 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CDH1P12830 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH1P12830 RNU4-21P-201ENST00000362802 126 ntBASIC3.83□□□□□ -1.8
CDH1P12830 RNU1-18P-201ENST00000363062 164 ntBASIC3.83□□□□□ -1.8
CDH1P12830 Y_RNA.194-201ENST00000363985 102 ntBASIC3.83□□□□□ -1.8
CDH1P12830 Y_RNA.302-201ENST00000364997 102 ntBASIC3.83□□□□□ -1.8
CDH1P12830 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH1P12830 RNU6-921P-201ENST00000384361 107 ntBASIC3.83□□□□□ -1.8
CDH1P12830 RNU6-1122P-201ENST00000384449 107 ntBASIC3.83□□□□□ -1.8
CDH1P12830 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CDH1P12830 RPL7AP73-201ENST00000413490 353 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH1P12830 NIPA2P1-201ENST00000426223 976 ntBASIC3.83□□□□□ -1.8
CDH1P12830 RPS27AP12-201ENST00000429552 465 ntBASIC3.83□□□□□ -1.8
CDH1P12830 KCTD9P3-201ENST00000434597 1169 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH1P12830 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH1P12830 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH1P12830 AL500522.2-201ENST00000448562 343 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AL162151.2-201ENST00000448875 158 ntBASIC3.83□□□□□ -1.8
CDH1P12830 RPL26P28-201ENST00000451325 435 ntBASIC3.83□□□□□ -1.8
CDH1P12830 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH1P12830 USP9YP10-201ENST00000454868 628 ntBASIC3.83□□□□□ -1.8
CDH1P12830 ARPC3P2-201ENST00000457786 533 ntBASIC3.83□□□□□ -1.8
CDH1P12830 RN7SL93P-201ENST00000463035 293 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH1P12830 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 MTATP6P22-201ENST00000507369 598 ntBASIC3.83□□□□□ -1.8
CDH1P12830 USP9YP5-201ENST00000511770 630 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH1P12830 AC026726.1-201ENST00000512859 601 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH1P12830 AC060788.1-201ENST00000521318 469 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 DEFB131D-201ENST00000526803 184 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH1P12830 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH1P12830 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 AC091516.1-201ENST00000549191 703 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH1P12830 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH1P12830 SULT1C2P1-202ENST00000562418 459 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC136624.4-201ENST00000573044 370 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH1P12830 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH1P12830 NF1P5-201ENST00000588287 448 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH1P12830 MTCYBP22-201ENST00000603788 447 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH1P12830 AC106028.5-201ENST00000610332 395 ntBASIC3.83□□□□□ -1.8
CDH1P12830 MIR7844-201ENST00000616161 122 ntBASIC3.83□□□□□ -1.8
CDH1P12830 ZYXP1-201ENST00000617638 118 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC018816.2-201ENST00000621460 353 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC092184.1-201ENST00000625042 715 ntBASIC3.83□□□□□ -1.8
CDH1P12830 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH1P12830 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH1P12830 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH1P12830 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH1P12830 AC114546.3-201ENST00000623582 1734 ntBASIC3.83□□□□□ -1.8
CDH1P12830 AC009229.4-201ENST00000623854 1947 ntBASIC3.83□□□□□ -1.8
CDH1P12830 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH1P12830 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH1P12830 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CDH1P12830 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDH1P12830 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH1P12830 AC117529.2-201ENST00000512159 2068 ntBASIC3.82□□□□□ -1.8
CDH1P12830 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH1P12830 ZNF37BP-203ENST00000452306 1352 ntBASIC3.82□□□□□ -1.8
CDH1P12830 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH1P12830 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH1P12830 RPL21P132-201ENST00000331267 462 ntBASIC3.82□□□□□ -1.8
CDH1P12830 MIR372-201ENST00000362225 67 ntBASIC3.82□□□□□ -1.8
CDH1P12830 RNU6-433P-201ENST00000363216 104 ntBASIC3.82□□□□□ -1.8
CDH1P12830 RNA5SP391-201ENST00000363456 119 ntBASIC3.82□□□□□ -1.8
CDH1P12830 RNU6-660P-201ENST00000364566 109 ntBASIC3.82□□□□□ -1.8
CDH1P12830 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CDH1P12830 RPL31P52-201ENST00000407532 367 ntBASIC3.82□□□□□ -1.8
CDH1P12830 RNU2-28P-201ENST00000410457 189 ntBASIC3.82□□□□□ -1.8
CDH1P12830 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH1P12830 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.82□□□□□ -1.8
CDH1P12830 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH1P12830 AL049610.1-201ENST00000423374 372 ntBASIC3.82□□□□□ -1.8
CDH1P12830 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH1P12830 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms