Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RPS29P26-201ENST00000477483 171 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC126121.1-201ENST00000482313 553 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CACNA1FO60840 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AP000889.1-201ENST00000530968 660 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC107918.3-201ENST00000533272 382 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AP002906.1-201ENST00000603405 233 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 ELOCP34-201ENST00000604436 327 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AL133507.1-201ENST00000605269 557 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1FO60840 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CACNA1FO60840 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1FO60840 AL672296.1-201ENST00000427780 2158 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 PWAR6-201ENST00000552334 4618 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 MIR513B-201ENST00000385136 84 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 MIR634-201ENST00000385208 97 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 RPL21P3-201ENST00000395517 478 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 RPL7P8-201ENST00000411964 730 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC090960.1-201ENST00000421072 306 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC099336.2-201ENST00000422457 254 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC006028.1-201ENST00000438379 402 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1FO60840 USP9YP25-201ENST00000457708 443 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC146507.2-201ENST00000460608 476 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CACNA1FO60840 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.87□□□□□ -1.79
CACNA1FO60840 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AC010306.1-201ENST00000523223 1117 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 CYB5AP5-201ENST00000549779 389 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.87□□□□□ -1.79
CACNA1FO60840 AL162274.2-201ENST00000614406 332 ntBASIC3.87□□□□□ -1.79
CACNA1FO60840 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.87□□□□□ -1.79
CACNA1FO60840 ELL2P3-201ENST00000457883 1602 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1FO60840 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1FO60840 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1FO60840 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1FO60840 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1FO60840 MIR22-201ENST00000362190 85 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 RNU6-1214P-201ENST00000363650 109 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 RN7SKP220-201ENST00000410611 288 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 TATDN1P1-201ENST00000414123 891 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.86□□□□□ -1.79
CACNA1FO60840 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.86□□□□□ -1.79
CACNA1FO60840 B3GNT2P1-201ENST00000434960 952 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.86□□□□□ -1.79
CACNA1FO60840 OR51B8P-201ENST00000449892 769 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.86□□□□□ -1.79
CACNA1FO60840 GTF2IP12-201ENST00000456547 356 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.86□□□□□ -1.79
CACNA1FO60840 AC011037.1-201ENST00000483964 558 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.86□□□□□ -1.79
CACNA1FO60840 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.86□□□□□ -1.79
CACNA1FO60840 AL353778.1-201ENST00000603149 408 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 AC080013.3-201ENST00000606839 578 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.86□□□□□ -1.79
CACNA1FO60840 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.86□□□□□ -1.79
CACNA1FO60840 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.86□□□□□ -1.79
CACNA1FO60840 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CACNA1FO60840 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1FO60840 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.86□□□□□ -1.79
CACNA1FO60840 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1FO60840 AL592437.2-201ENST00000421655 2434 ntBASIC3.86□□□□□ -1.79
CACNA1FO60840 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1FO60840 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1FO60840 HMGB1P13-201ENST00000406019 642 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 RNU2-17P-201ENST00000410290 190 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 RPL26P37-201ENST00000411983 438 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC093698.1-201ENST00000423843 571 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 RPL35AP12-201ENST00000425362 338 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.85□□□□□ -1.79
CACNA1FO60840 MTND4P32-201ENST00000437189 1237 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 UBE2D3P4-201ENST00000441973 436 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1FO60840 HMGB1P5-202ENST00000451497 985 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 RN7SL442P-201ENST00000473804 320 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 MTND2P14-201ENST00000482139 351 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AC091435.1-201ENST00000505442 584 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AC010620.1-201ENST00000601088 1102 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC024153.1-201ENST00000603103 365 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC123786.2-201ENST00000603459 275 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AC007349.4-201ENST00000608114 532 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC116447.1-201ENST00000613153 453 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC008121.2-201ENST00000614647 523 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms