Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.82□□□□□ -1.96
SGCEO43556 MTCO1P18-201ENST00000455518 1419 ntBASIC2.82□□□□□ -1.96
SGCEO43556 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.82□□□□□ -1.96
SGCEO43556 AC093831.2-201ENST00000624393 3427 ntBASIC2.82□□□□□ -1.96
SGCEO43556 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SGCEO43556 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.82□□□□□ -1.96
SGCEO43556 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SGCEO43556 ZNF807-201ENST00000328088 1707 ntBASIC2.82□□□□□ -1.96
SGCEO43556 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SGCEO43556 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
SGCEO43556 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
SGCEO43556 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SGCEO43556 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 RNVU1-3-201ENST00000364313 161 ntBASIC2.81□□□□□ -1.96
SGCEO43556 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 RNU6-761P-201ENST00000384148 107 ntBASIC2.81□□□□□ -1.96
SGCEO43556 MIR7-3-201ENST00000384898 110 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.81□□□□□ -1.96
SGCEO43556 AC244453.4-201ENST00000419150 388 ntBASIC2.81□□□□□ -1.96
SGCEO43556 RFESDP1-201ENST00000422350 461 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AC073310.1-201ENST00000423226 1033 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AL590623.1-201ENST00000427864 105 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AC010881.1-201ENST00000433830 235 ntBASIC2.81□□□□□ -1.96
SGCEO43556 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.81□□□□□ -1.96
SGCEO43556 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SGCEO43556 MTND1P33-201ENST00000446251 917 ntBASIC2.81□□□□□ -1.96
SGCEO43556 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
SGCEO43556 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.81□□□□□ -1.96
SGCEO43556 HMGN3P1-201ENST00000453847 193 ntBASIC2.81□□□□□ -1.96
SGCEO43556 HMGB1P25-201ENST00000468402 607 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AL136126.1-201ENST00000473603 402 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.81□□□□□ -1.96
SGCEO43556 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.81□□□□□ -1.96
SGCEO43556 SCARNA20.6-201ENST00000517251 106 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.81□□□□□ -1.96
SGCEO43556 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.81□□□□□ -1.96
SGCEO43556 SETP2-201ENST00000553886 926 ntBASIC2.81□□□□□ -1.96
SGCEO43556 CKS1BP3-201ENST00000600888 237 ntBASIC2.81□□□□□ -1.96
SGCEO43556 ELOCP35-201ENST00000604289 336 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AC009220.3-201ENST00000604318 586 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AL359198.2-201ENST00000611836 194 ntBASIC2.81□□□□□ -1.96
SGCEO43556 AL354976.1-201ENST00000613843 387 ntBASIC2.81□□□□□ -1.96
SGCEO43556 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.81□□□□□ -1.96
SGCEO43556 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.81□□□□□ -1.96
SGCEO43556 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.81□□□□□ -1.96
SGCEO43556 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.81□□□□□ -1.96
SGCEO43556 AC090897.3-201ENST00000636973 1157 ntBASIC2.81□□□□□ -1.96
SGCEO43556 U6.105-201ENST00000637379 88 ntBASIC2.81□□□□□ -1.96
SGCEO43556 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 AL353743.1-202ENST00000431724 1695 ntBASIC2.81□□□□□ -1.96
SGCEO43556 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
SGCEO43556 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.81□□□□□ -1.96
SGCEO43556 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SGCEO43556 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.8□□□□□ -1.96
SGCEO43556 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SGCEO43556 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SGCEO43556 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SGCEO43556 AL136520.1-201ENST00000600311 1322 ntBASIC2.8□□□□□ -1.96
SGCEO43556 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SGCEO43556 RNU6-252P-201ENST00000363232 107 ntBASIC2.8□□□□□ -1.96
SGCEO43556 RNU6-1249P-201ENST00000363237 111 ntBASIC2.8□□□□□ -1.96
SGCEO43556 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.8□□□□□ -1.96
SGCEO43556 RNU6-444P-201ENST00000383988 108 ntBASIC2.8□□□□□ -1.96
SGCEO43556 TATDN1P1-201ENST00000414123 891 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AC063979.1-201ENST00000415539 377 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 RPL21P32-201ENST00000419877 477 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AC006960.1-201ENST00000419980 153 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 MTATP6P4-201ENST00000427725 675 ntBASIC2.8□□□□□ -1.96
SGCEO43556 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 AL513321.1-201ENST00000441175 761 ntBASIC2.8□□□□□ -1.96
SGCEO43556 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 RSL24D1P2-201ENST00000445584 366 ntBASIC2.8□□□□□ -1.96
SGCEO43556 PRDX3P3-201ENST00000447765 522 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.8□□□□□ -1.96
SGCEO43556 RN7SL75P-201ENST00000461926 281 ntBASIC2.8□□□□□ -1.96
SGCEO43556 OR5H5P-201ENST00000503164 928 ntBASIC2.8□□□□□ -1.96
SGCEO43556 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 MTCO3P44-201ENST00000510977 541 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 RNU1-143P-201ENST00000516296 146 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.8□□□□□ -1.96
SGCEO43556 AC022690.1-201ENST00000526681 550 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.8□□□□□ -1.96
SGCEO43556 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.8□□□□□ -1.96
SGCEO43556 AC022069.1-201ENST00000582910 658 ntBASIC2.8□□□□□ -1.96
SGCEO43556 XIAPP1-201ENST00000603162 600 ntBASIC2.8□□□□□ -1.96
SGCEO43556 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.8□□□□□ -1.96
SGCEO43556 U1.23-201ENST00000610293 146 ntBASIC2.8□□□□□ -1.96
SGCEO43556 uc_338.25-201ENST00000613756 156 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms