Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.73□□□□□ -1.65
NPHP1O15259 BX842559.1-201ENST00000419615 532 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.73□□□□□ -1.65
NPHP1O15259 MTCO2P25-201ENST00000447065 681 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 RPL39P6-201ENST00000448289 150 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.73□□□□□ -1.65
NPHP1O15259 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 RPL21P10-201ENST00000463521 490 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 RPS26P15-201ENST00000488067 348 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.73□□□□□ -1.65
NPHP1O15259 AC092045.1-201ENST00000495716 1231 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
NPHP1O15259 OR7E13P-201ENST00000526052 910 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.73□□□□□ -1.65
NPHP1O15259 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.73□□□□□ -1.65
NPHP1O15259 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.73□□□□□ -1.65
NPHP1O15259 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.73□□□□□ -1.65
NPHP1O15259 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.73□□□□□ -1.65
NPHP1O15259 AC027449.1-201ENST00000608890 407 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 AC107075.1-201ENST00000613695 314 ntBASIC4.73□□□□□ -1.65
NPHP1O15259 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.73□□□□□ -1.65
NPHP1O15259 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
NPHP1O15259 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPHP1O15259 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NPHP1O15259 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NPHP1O15259 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.73□□□□□ -1.65
NPHP1O15259 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
NPHP1O15259 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.72□□□□□ -1.65
NPHP1O15259 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 USP8P1-201ENST00000494673 3183 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.72□□□□□ -1.65
NPHP1O15259 SNRPEP2-201ENST00000397592 279 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 RPL7P60-201ENST00000397636 735 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.72□□□□□ -1.65
NPHP1O15259 JKAMPP1-201ENST00000413804 919 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 MTND2P9-201ENST00000422293 931 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 AC092427.1-201ENST00000439177 601 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 MTND2P20-201ENST00000440805 661 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 EXTL2P1-201ENST00000446218 416 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.72□□□□□ -1.65
NPHP1O15259 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.72□□□□□ -1.65
NPHP1O15259 AC073387.1-201ENST00000453261 709 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 USP9YP34-201ENST00000453983 808 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.72□□□□□ -1.65
NPHP1O15259 BX510359.1-201ENST00000456973 237 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 SNORD105B-201ENST00000458770 79 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 RPL31P13-201ENST00000484151 370 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AC025554.1-201ENST00000505641 188 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 HMGB1P28-201ENST00000507778 552 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.72□□□□□ -1.65
NPHP1O15259 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.72□□□□□ -1.65
NPHP1O15259 RNU6-415P-201ENST00000516252 97 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.72□□□□□ -1.65
NPHP1O15259 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.72□□□□□ -1.65
NPHP1O15259 RFPL1S-203ENST00000539579 330 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.72□□□□□ -1.65
NPHP1O15259 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 AL133457.1-201ENST00000564251 987 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 VN1R92P-201ENST00000598511 928 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AL031985.2-201ENST00000600955 480 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AC103881.1-201ENST00000603476 538 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AC244258.1-201ENST00000637553 1071 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.72□□□□□ -1.65
NPHP1O15259 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
NPHP1O15259 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NPHP1O15259 AC099786.3-201ENST00000565735 1410 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.72□□□□□ -1.65
NPHP1O15259 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.72□□□□□ -1.65
NPHP1O15259 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.71□□□□□ -1.66
NPHP1O15259 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.71□□□□□ -1.66
NPHP1O15259 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NPHP1O15259 RNU6-1249P-201ENST00000363237 111 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 RNU4-92P-201ENST00000363783 136 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NPHP1O15259 MIR634-201ENST00000385208 97 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 MIR607-201ENST00000385241 96 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 RNU6-1242P-201ENST00000391052 103 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 NDUFB4P4-201ENST00000404822 243 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NPHP1O15259 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.71□□□□□ -1.66
NPHP1O15259 AC012065.2-201ENST00000421295 375 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 HSFY1P1-201ENST00000423928 1178 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 USP9YP11-201ENST00000427537 717 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 RPL21P112-201ENST00000434403 463 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 CYCSP32-201ENST00000440548 321 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.71□□□□□ -1.66
NPHP1O15259 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.71□□□□□ -1.66
NPHP1O15259 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.71□□□□□ -1.66
NPHP1O15259 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.71□□□□□ -1.66
NPHP1O15259 RPS15AP17-201ENST00000470598 390 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 ACTG1P13-201ENST00000486987 1043 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 HMGB1P22-201ENST00000505315 124 ntBASIC4.71□□□□□ -1.66
NPHP1O15259 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms