Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 OR1S1-201ENST00000624470 978 ntBASIC3.3□□□□□ -1.88
CDX4O14627 AC011978.2-201ENST00000569835 2054 ntBASIC3.3□□□□□ -1.88
CDX4O14627 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDX4O14627 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.3□□□□□ -1.88
CDX4O14627 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDX4O14627 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CDX4O14627 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.29□□□□□ -1.88
CDX4O14627 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.29□□□□□ -1.88
CDX4O14627 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDX4O14627 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.29□□□□□ -1.88
CDX4O14627 CEP170P1-201ENST00000502249 4587 ntBASIC3.29□□□□□ -1.88
CDX4O14627 HMGB1P5-201ENST00000255320 642 ntBASIC3.29□□□□□ -1.88
CDX4O14627 OR5H2-201ENST00000355273 945 ntBASIC3.29□□□□□ -1.88
CDX4O14627 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDX4O14627 RNU6-619P-201ENST00000365146 108 ntBASIC3.29□□□□□ -1.88
CDX4O14627 RNU6-444P-201ENST00000383988 108 ntBASIC3.29□□□□□ -1.88
CDX4O14627 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CDX4O14627 AC007899.1-201ENST00000412776 775 ntBASIC3.29□□□□□ -1.88
CDX4O14627 VPS26BP1-201ENST00000417155 755 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC004552.1-201ENST00000419089 348 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC092832.1-201ENST00000422934 400 ntBASIC3.29□□□□□ -1.88
CDX4O14627 GTF2IP3-201ENST00000433887 494 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.29□□□□□ -1.88
CDX4O14627 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.29□□□□□ -1.88
CDX4O14627 AL031313.1-201ENST00000448435 256 ntBASIC3.29□□□□□ -1.88
CDX4O14627 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.29□□□□□ -1.88
CDX4O14627 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.29□□□□□ -1.88
CDX4O14627 RPS26P3-201ENST00000470205 348 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC090543.2-201ENST00000483963 348 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC004057.1-201ENST00000485827 348 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC025445.1-201ENST00000502728 300 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.29□□□□□ -1.88
CDX4O14627 RNU6-202P-201ENST00000515998 96 ntBASIC3.29□□□□□ -1.88
CDX4O14627 OR4C2P-201ENST00000530855 1064 ntBASIC3.29□□□□□ -1.88
CDX4O14627 OR8K4P-201ENST00000534608 872 ntBASIC3.29□□□□□ -1.88
CDX4O14627 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDX4O14627 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.29□□□□□ -1.88
CDX4O14627 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.29□□□□□ -1.88
CDX4O14627 AC044913.1-201ENST00000557200 430 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.29□□□□□ -1.88
CDX4O14627 AC006539.2-201ENST00000601729 572 ntBASIC3.29□□□□□ -1.88
CDX4O14627 LLPHP1-201ENST00000603571 367 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AL162713.1-201ENST00000604480 262 ntBASIC3.29□□□□□ -1.88
CDX4O14627 IGHV3-29-201ENST00000604817 344 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AL583856.2-201ENST00000606298 543 ntBASIC3.29□□□□□ -1.88
CDX4O14627 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.29□□□□□ -1.88
CDX4O14627 PART1_2.1-201ENST00000612397 250 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC006386.1-201ENST00000619436 415 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC091905.1-201ENST00000624400 311 ntBASIC3.29□□□□□ -1.88
CDX4O14627 AC087821.2-201ENST00000637086 450 ntBASIC3.29□□□□□ -1.88
CDX4O14627 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.29□□□□□ -1.88
CDX4O14627 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDX4O14627 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.29□□□□□ -1.88
CDX4O14627 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDX4O14627 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDX4O14627 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDX4O14627 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDX4O14627 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDX4O14627 AC025125.1-201ENST00000624743 1922 ntBASIC3.29□□□□□ -1.88
CDX4O14627 NMD3P1-201ENST00000439704 1488 ntBASIC3.28□□□□□ -1.88
CDX4O14627 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDX4O14627 TNPO1P3-201ENST00000436471 2662 ntBASIC3.28□□□□□ -1.88
CDX4O14627 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.28□□□□□ -1.88
CDX4O14627 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDX4O14627 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDX4O14627 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDX4O14627 DCAF13P1-201ENST00000495256 1330 ntBASIC3.28□□□□□ -1.88
CDX4O14627 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDX4O14627 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDX4O14627 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDX4O14627 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.28□□□□□ -1.88
CDX4O14627 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDX4O14627 MIR153-1-201ENST00000384914 90 ntBASIC3.28□□□□□ -1.88
CDX4O14627 DSTNP4-201ENST00000399472 474 ntBASIC3.28□□□□□ -1.88
CDX4O14627 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.28□□□□□ -1.88
CDX4O14627 MTATP6P20-201ENST00000414147 562 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AL449283.1-202ENST00000418249 604 ntBASIC3.28□□□□□ -1.88
CDX4O14627 RPL31P45-201ENST00000419532 356 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC027644.1-201ENST00000419595 298 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC233981.1-201ENST00000423224 461 ntBASIC3.28□□□□□ -1.88
CDX4O14627 RPL35AP12-201ENST00000425362 338 ntBASIC3.28□□□□□ -1.88
CDX4O14627 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.28□□□□□ -1.88
CDX4O14627 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.28□□□□□ -1.88
CDX4O14627 OR10R1P-201ENST00000441524 1141 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.28□□□□□ -1.88
CDX4O14627 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.28□□□□□ -1.88
CDX4O14627 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.28□□□□□ -1.88
CDX4O14627 HMGB3P6-201ENST00000444896 598 ntBASIC3.28□□□□□ -1.88
CDX4O14627 RPS29P31-201ENST00000446147 164 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC140076.1-201ENST00000449897 361 ntBASIC3.28□□□□□ -1.88
CDX4O14627 Z99714.1-201ENST00000450463 807 ntBASIC3.28□□□□□ -1.88
CDX4O14627 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.28□□□□□ -1.88
CDX4O14627 AC004924.1-201ENST00000480160 781 ntBASIC3.28□□□□□ -1.88
CDX4O14627 MTCO3P35-201ENST00000485582 781 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC093752.1-206ENST00000511823 336 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC112673.1-201ENST00000513168 575 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC018797.3-201ENST00000513388 1241 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.28□□□□□ -1.88
CDX4O14627 RNA5SP135-201ENST00000517019 125 ntBASIC3.28□□□□□ -1.88
CDX4O14627 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms