Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RNA5SP447-201ENST00000363749 119 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RPS20P2-201ENST00000402520 389 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RN7SKP267-201ENST00000410381 285 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RN7SKP27-201ENST00000410684 333 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RNU2-8P-201ENST00000410727 190 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 ELOCP19-201ENST00000411919 318 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC004987.3-201ENST00000413879 771 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RPL30P16-201ENST00000419341 429 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RPEP3-201ENST00000425462 676 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 PSMA2P3-201ENST00000429685 675 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC016831.4-201ENST00000438302 307 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RPL17P49-201ENST00000443728 411 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 TDGF1P1-201ENST00000445734 527 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 GAPDHP17-201ENST00000449858 1001 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RPS20P32-201ENST00000456044 356 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC091133.4-201ENST00000511142 308 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC026402.1-201ENST00000513642 170 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RN7SKP244-201ENST00000516513 307 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 CCNG2P1-201ENST00000549521 1000 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 SETP2-201ENST00000553886 926 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AL157394.1-201ENST00000562983 1224 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 CKS1BP3-201ENST00000600888 237 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AL008729.2-201ENST00000606393 473 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC098614.4-201ENST00000607601 462 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC126118.1-201ENST00000607744 628 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AC007684.1-201ENST00000609671 477 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 AL592437.2-201ENST00000421655 2434 ntBASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB1Q9Y5F3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB1Q9Y5F3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.65□□□□□ -1.66
PCDHB1Q9Y5F3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB1Q9Y5F3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB1Q9Y5F3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
PCDHB1Q9Y5F3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHB1Q9Y5F3 Y_RNA.46-201ENST00000362695 102 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 RNA5SP258-201ENST00000362750 119 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 SNORD113.2-201ENST00000364166 89 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 RN7SKP226-201ENST00000364912 300 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 RNU2-15P-201ENST00000410692 191 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 OR51AB1P-201ENST00000429046 620 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 IFNWP4-201ENST00000453148 294 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AP000942.1-201ENST00000463969 747 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC091153.1-201ENST00000466297 402 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC007537.2-201ENST00000472093 511 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC004924.1-201ENST00000480160 781 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC022483.1-201ENST00000514020 567 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 RNU6-430P-201ENST00000517078 107 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC134698.5-201ENST00000519444 336 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC024224.1-201ENST00000538284 609 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC068446.3-201ENST00000555285 382 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AL161713.1-201ENST00000555538 145 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 AC034268.2-201ENST00000571784 482 ntBASIC4.65□□□□□ -1.67
PCDHB1Q9Y5F3 MIR3913-1-201ENST00000577744 102 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms