Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 BCLAF1P2-201ENST00000624956 2609 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AL359922.2-201ENST00000581788 3017 ntBASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-4Q9BYR3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CCDC174-202ENST00000383794 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AL162171.3-201ENST00000617439 3178 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 INTS3-210ENST00000512605 3442 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AC239859.1-201ENST00000449715 2594 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 EFHB-201ENST00000295824 2823 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 MAPK10-304ENST00000641341 3984 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 TTC14-201ENST00000296015 2881 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CYP4A11-202ENST00000371904 1760 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RSPH10B2-201ENST00000297186 2923 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RSPH10B-201ENST00000337579 2923 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 TCF7-202ENST00000378560 2929 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AL159987.1-201ENST00000347911 293 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORD45.1-201ENST00000363181 77 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-743P-201ENST00000364151 106 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORA16B-201ENST00000364674 135 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-283P-201ENST00000364788 107 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-336P-201ENST00000364891 107 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AP002088.1-201ENST00000382740 395 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-291P-201ENST00000384720 107 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR518C-201ENST00000384822 101 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 U3.36-201ENST00000408418 213 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RN7SKP167-201ENST00000411047 285 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RNA5SP304-201ENST00000411199 104 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AL513331.1-201ENST00000411908 397 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 RPL30P3-201ENST00000424262 333 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC01006-203ENST00000425712 661 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 HSPE1P16-201ENST00000426640 348 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AC015818.7-201ENST00000428754 109 ntBASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-4Q9BYR3 AL590682.1-201ENST00000437248 344 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms