Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 HMGB1P11-201ENST00000413899 637 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 RBMY1KP-201ENST00000423480 476 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC092447.3-201ENST00000426027 686 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 ELOCP8-201ENST00000439309 332 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 ELOCP15-201ENST00000442090 332 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AL359073.1-201ENST00000448036 403 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 RPL30P9-201ENST00000465586 330 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 RPL7P1-201ENST00000468161 747 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC026979.1-201ENST00000492525 396 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC093824.1-201ENST00000508796 343 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 PARP4P3-201ENST00000510265 317 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 LTV1P1-201ENST00000510683 1237 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC017037.2-201ENST00000513850 890 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 MTATP6P15-201ENST00000527233 835 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC068587.4-201ENST00000533893 186 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC008015.1-201ENST00000555505 465 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC018638.7-201ENST00000605836 1114 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AL391497.1-201ENST00000608671 547 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AL355810.1-201ENST00000614629 552 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC083809.1-201ENST00000615051 472 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC009237.17-201ENST00000618111 748 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 MIR6758-201ENST00000620653 63 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC002550.2-201ENST00000621246 394 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC007671.2-201ENST00000637344 619 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 AC092447.10-201ENST00000620607 1652 ntBASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERPUD2Q9BSE4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC008725.1-201ENST00000605123 2263 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL672167.1-206ENST00000356293 943 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RNU1-14P-201ENST00000362759 152 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RNU6-433P-201ENST00000363216 104 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RNU5A-2P-201ENST00000384337 116 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RPL36AP36-201ENST00000418616 301 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 MTCO1P39-201ENST00000426148 480 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RPS6P15-201ENST00000431996 751 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RPS3AP54-201ENST00000435535 734 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 CBX1P1-201ENST00000440184 427 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL831737.1-201ENST00000441288 271 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 PHBP16-201ENST00000446318 950 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 OR6C5P-201ENST00000452388 923 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RPL23AP81-201ENST00000455252 467 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RN7SL303P-201ENST00000469773 251 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC068587.2-201ENST00000478386 781 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC034222.1-201ENST00000494052 532 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RNA5SP49-201ENST00000516450 115 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 RNA5SP468-201ENST00000516782 93 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 OR5M7P-201ENST00000526140 972 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC087276.1-201ENST00000529659 480 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC105233.3-201ENST00000531125 744 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC007954.1-201ENST00000554198 494 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 MTND3P12-201ENST00000559068 328 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC008751.2-201ENST00000597885 980 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AC013444.2-201ENST00000603317 787 ntBASIC4.36□□□□□ -1.71
HERPUD2Q9BSE4 AL451086.1-201ENST00000605596 223 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms